Gene VC0395_A2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A2080 
Symbol 
ID5136337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp2236774 
End bp2237256 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID640533536 
Producthypothetical protein 
Protein accessionYP_001217996 
Protein GI147675223 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000000000185398 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATGA TGAACTACGC GACACTTCCT CCCGCTGGTT TCTTTCGGCG TTTAGGGGCA 
TGGACCTACG ACGCACTGAT CGTAATGGCA ATTCTAATGA TGGCTGGCGG CGTAGTCGTC 
GCAGTGCTTG AAGCTTTGGT GGCAGCAGGG CTCATGAGCT ACGCACCGTA TCAAGATGCG 
AGCGATCTTC TCTCTTCTCA TCCAATTTGG AGTCCAGTGT ATACCGTTTA TCTTGCCTTG 
GTTTGGATCT CTTTTTTTGT TTATTTCTGG ACTCGCGGCG GACAAACGCT AGGTATGCGC 
GCATGGAAAA TGCACATTTG CACTGAGGAA GGTCACCACA TCTCAGCTAC ACAAGCGCTG 
ATCCGTTTAG CAACATCCGG TTTTGGGCTT GCCAACTTGA CTGTGTTGTT TGATACGAAA 
AAACGTGGCT TTCACGATAT CTGGGCTAAA ACAAAGGTCG TTGTGTTACC GAAAGCTAAT 
TAA
 
Protein sequence
MIMMNYATLP PAGFFRRLGA WTYDALIVMA ILMMAGGVVV AVLEALVAAG LMSYAPYQDA 
SDLLSSHPIW SPVYTVYLAL VWISFFVYFW TRGGQTLGMR AWKMHICTEE GHHISATQAL 
IRLATSGFGL ANLTVLFDTK KRGFHDIWAK TKVVVLPKAN