| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1922 |
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| Symbol | radA |
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| ID | 5136477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 2050984 |
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| End bp | 2052363 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533379 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001217846 |
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| Protein GI | 147673564 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000667281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGTGA AAGCTAAGCG CGCCTATGTA TGTAATGAAT GTGGAGCGGA TTTTCCGCGT
TGGCAAGGAC AGTGTAATGC CTGTGGTTCG TGGAATTCGA TTTCAGAAGT TCGTTTAGCG
GCTTCACCGC AAGTGGCGCG CAATGAAAGG TTGGTCGGTT ATGCGGGAGC TCTTGAAGCG
AAAGTACAAA CTTTGGCTGA TATTGATTTA CAAGAAGTGC CTCGATTCAC CAGTGGCTTT
AAAGAACTAG ATCGCGTACT TGGCGGCGGA ATTGTGCCGG GTGCGGCGAT TTTGATTGGT
GGTAATCCGG GCGCGGGTAA ATCGACCTTA CTACTGCAAA CCATGTGTTT ACTTTCCGGA
CAGATGCCGA CGTTGTACGT GACGGGCGAA GAATCGTTGC AGCAGGTCGC GATGCGTGCT
TCACGGCTTG GTTTGCCGAA ACAGCATCTA AAAATGCTCT CAGAAACCAA TGTGGATCGG
ATTTGCCAGA TTGCTGAGCA AGAAAAGCCG CGCATTATGG TCATCGATTC GATTCAAGTG
ATGCATGTGG CGGATGTGCA ATCGTCACCG GGGAGTGTCG CGCAAGTGCG TGAGTCGGCC
ACGGCGCTTA CGCGTTATGC TAAACAAAAT AATGTGGCGG TATTTATTGT GGGCCACGTA
ACCAAAGATG GTACGTTGGC GGGACCTAAA GTTCTTGAAC ACATCATCGA TTGCTCGATT
CTGCTTGATG GCGATACCGA CAGCCGTTTT CGTACACTCC GTAGTCATAA AAACCGTTTT
GGTGCGGTCA ATGAACTCGG TGTGTTTGCG ATGACTGGAC AAGGGATGCG TGAGGTGAGT
AATCCATCGG CGATTTTCCT TTCTCGTGGA GAAGAAGCCA CATCTGGTAG CTCAGTGATG
GTGGTGTGGG AAGGAACTCG CCCACTCTTA GTTGAGATTC AAGCGTTGGT CGATTACTCA
CAACTCGCTA ACCCACGACG CGTTGCGGTT GGCTTAGAAC AAAACCGTCT CTCTTTATTA
CTGGCCGTGC TGCATAAACA CGGTGGTTTG CAAATGGCCG ATCAGGATGT GTTTGTGAAC
GTAGTCGGTG GCGTGAAAGT GACGGAGACC AGTGCAGATT TAGCGCTACT CATGGCGTTA
TTGTCGAGTT TTCGTGATCG TCCGCTGCCA AAAGATGTCG TGGTTTTTGG TGAAGTCGGA
TTGGCTGGAG AAATTCGTCC CGTACCGAGT GGTCAAGAGC GCCTTAACGA AGCCTTCAAA
CATGGTTTTA AGAAAGCGAT TGTGCCGATT GCCAATATGC CGAAAGGTGG TATTGAAGGT
ATGCAGATCC ACGGTGTGAA AAAGCTTTCT GATGCGATCG CGGCTTTTGA TGAGCTGTAA
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| Protein sequence | MIVKAKRAYV CNECGADFPR WQGQCNACGS WNSISEVRLA ASPQVARNER LVGYAGALEA
KVQTLADIDL QEVPRFTSGF KELDRVLGGG IVPGAAILIG GNPGAGKSTL LLQTMCLLSG
QMPTLYVTGE ESLQQVAMRA SRLGLPKQHL KMLSETNVDR ICQIAEQEKP RIMVIDSIQV
MHVADVQSSP GSVAQVRESA TALTRYAKQN NVAVFIVGHV TKDGTLAGPK VLEHIIDCSI
LLDGDTDSRF RTLRSHKNRF GAVNELGVFA MTGQGMREVS NPSAIFLSRG EEATSGSSVM
VVWEGTRPLL VEIQALVDYS QLANPRRVAV GLEQNRLSLL LAVLHKHGGL QMADQDVFVN
VVGGVKVTET SADLALLMAL LSSFRDRPLP KDVVVFGEVG LAGEIRPVPS GQERLNEAFK
HGFKKAIVPI ANMPKGGIEG MQIHGVKKLS DAIAAFDEL
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