| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1801 |
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| Symbol | vibF |
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| ID | 5136954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1906748 |
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| End bp | 1914001 |
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| Gene Length | 7254 bp |
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| Protein Length | 2417 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640533258 |
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| Product | nonribosomal peptide synthetase VibF |
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| Protein accession | YP_001217726 |
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| Protein GI | 147674802 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTTTAA AGATGAAAGA AATGACAGCA ATGCAAGCGG CTTATTGGCT AGGGCGTCAA
CACGACTGCT TGCTCGATGG TGTGGCCGCG CATCTCTACG CCGAATTTGA TGGTCAAGCA
TTAAATCGAC AGGCGCTAAC GGAAGCGGTA CGTGCGCTGT ACGCGAAACA TCCCATGTTA
CGTTTAGCGA TCACCAAGGA TGGACAGCAG AAGATCTTGC CGCTCTCAAC TTTCCATCAG
CTTAAAGTGG ATGACCTATC ACAATGGAAG CCAGATGAGG TGGAGTCTTT TGTGCATACT
AAGCGCCAGC GAATGACCCA CCAGATGCTC GATTTAACTC AGGGAAACCC GATTGAGATC
AGCTTGACTC TGTTGCCTGA GGGCAAACAC CGATTACACA TTGATGCGGA TATGATTGCG
TGTGATGCAC AAAGTTTTCG GCTGTTGGTG GACGATCTCA CCTCACTCTA TTTAGAGGCC
ATAGAGCATC GATTAGAGAT CATTGAGTCT GATGTGGTGA CTTTTTTCCA ATATCTTGAT
GCTCAGCAAG CCGATCGTGC TTTGGCAAAA CGCAAAGAGG TGGATAAGAA ATGGTGGCAA
GAGCGTCTTG CGACGATTCC CGCCGAGCCA AGTTTGCCTT ATCAACCCGT ACCAACCGAC
GCCGTTAGCG CAAACAGCCA AAGGTTTGCA CACTGGTTCA CTCCAGTGGA GCGCAAAGGG
TTGGCGGAGG TTGCGCGGCA ACATCATCTC ACACTGACCC AACTGACATT GGCACTCTTT
TCACAAGTGA TTGCCAATGC TTGCCAAGAG AGACAATTTC GACTCAATGT ACCTACATTC
CATCGCGGCA ATCGCTCTTT GGATATTGAA CACACGATCG GCGATTTTTC CAATTTGCTG
ATTTTTAGCG CCGATGTGGG AACGACTCAG ACCCTGTTAA GCCTGTGTCA GCAAACGGCT
AACCAACTGC ATCAATTACT TCGCCATGAA AGCTATTCAG GGGTTAGCGT GATGCGCGAT
TTATCGCGGA AACAGGGTGG GGTGCAGCGT TCACCGATAG TCTTTACCTC AGGCATGGAA
ATGCGAGACG AGGAGATCTT TTCCGATCAT GTCACTCAGC ATTTAGGGCG TATGAATTGG
GTGATTTCGC AGGGAGCGCA GGTGACTCTC GATGCGCAAA TTGCTCCGGC TTATGAAGGG
ATTTTGCTCA ATTGGGATGT GCGAATGGAA AACTTCGCTG ATAAGGACAT CACAGCGCTT
TTCGCGCATT ACGTTGATTT GATCCGCTGT GTGGCGCTGC ATCCTGAGAT GATGCAGCAA
AGCGTACAAC AGATTGACGC GCAACTCGGT TATGCTCGCC GCGAGTCGAT TCAGGAGATG
CCACTGACCC CTTTACAACA AGCTTACTTG CTAGGTCGCT CAACCCAAAT TGCCTTAGGC
GGCGTCGCGA TGCATGAGTT TCGTGAGTAT CGAGGTCACA TCGACACTCA GTCACTGCAT
AGCCGTCTGC TCTATCTCGT TGAGCATATT CCTGCCTTGA GAACTCGCAT TGATCAAGAG
AAATGGATTC AGTGGGTCTC TCCTTGCATA GCGTTAAATT GGCAAGCCAT CGATTTACAG
CATCTTTCCC GCGAACAAGC CTTATTAGCG GTTGAGCCAG TCAGGCAGCA ATATCAGCAG
CGGATGCATG ATTTAACGCG CTCGCCCTGG CAAATCTGTG TGGTGCAACT GCCAATAGAA
GAGCAAGAGG AGTTCAGCTC CATCGTATTG ACCAGCTTTG ATGCTTTGAT TGTCGATGGT
CGCACCCATG CACTCATTCT TGCTGCACTA CTAGGAAGCG AAGAACCCGA TATAACTCAG
GTGGTGCAAA ATGCTCGTGA TACTCAGTCC ATCTCGCCGC AATTCGCCTC CAAAAAAGCG
CAAGATGAAG CGTATTGGAA AAGCAAACTT CATCCTGATT GCCCGCCGCC AGCACTGCCT
TGGAAACAAG CATTAGAGAC GATCACTACG TCTCGTTATG CTCGTGAAAG TTTGCAAATA
CCCAAAGAGA GTGTCGGTAA GCTCAATCGA TGCGGCATTG AAAATGGCTT ATTTCTCAAT
TCCTTGCTGA CAGCAACCAT CTTGGACGTG CTCTCCTATT GGACAACCGA AATCGGGATG
CGAGTGGGTT TTCCGGTATT AATTCCAAGC AGTAATGCGA TTGATGGCAA TGAGTCATCC
TTTGTGATCT TAGAGCATGA AAAATCCACC CTGAGTTTGC TGAGCCAAGC GAGCAAGCTA
CAGCGTGAGA TGCTAGAGGC TCTTGAGCAT CTTGCTTTTT CTGGCGTCGA TCTTAACCGT
CTGTTGATGA ATCAAGCGCC GCAAGCTCTG GTGCTGCCGG TTGTGTTAAC CAATGGTTTG
TCTTGGAAAA CCCTGAATCC AGAGGATGCT GTCACTCTGT TCGATGGGGT AACGCAAACT
CCGCAGGTGG CTTTAGATAT TCGCTTAACT TACGACGAGC AGAAAAACCT CATCATCAGC
TTTGATTATG CTTTAGCGGT TTTAGAGACT GAGCTTATCC GCGAGATGTT AAGTGCCTTA
CATCATCGCT TGAGTCAGAT CACTTCGTCA GCATCATTGG CCGCGCCGCT TGAGCCATGT
ATCGACCTTT CACACTACCG TTTTAATAGC GATGAGTCGG CCAGTCACGA TTGCGATTTT
CTTGCCAAGT TAGCGCAGCA ATTGTTTGTC CGCACAGAGG ATAAAACCGC TGTGATCTGC
GGTGAACAAA CCCTTTCTTA TGCTCAATTG GGTGAGCAGG TTCAGCGCGT GATGTGGCAG
CTCAAAGCGC GAGGGTTGAC CACAGGAAAT GTGCTCGCCA TTTGCTTGCC ACGCAGTGTT
GAACATATCG TCATCAGTTT GGCTTCTGCA CTTTCGGGGA TTATCTGGGT ACCTATTGAT
GCTGCGTCTC CCAAAGAGCG TCTGAATTAC CTTTTAGAAA ATTGTCACGC CGATCTGGTG
GTGATGGATA AGCCCTGTGA GTTTGGCAAT GTGATCGCTT TTGATGCCTT GATTGAGCCT
GTCTTATTCG CCGATGGAGT ACCTGACGTT ACACCACTCG ATCAATTAAG CCGATTAAGC
CAAAGCCAAC AAACGGCTTA TTATCTTTAT ACCTCTGGCA CTACGGGCAA ACCTAAGTGC
GTGGTGGTCA ATAATCAGGC GACCTCGAAT GTGATTGGTC AAACTGGCCA AGCGTGGCAT
CTCACCAGTG AGGATGTGGT GATGTCAGTG ACGCCATTGC ATCATGATAT GTCGGTGTTT
GATCTCTTTG CCACCTTGAG CTTCGGAGCG ACGTTAGTTC TTCCCGCTGG GCATGAAGAA
AAAGATGCGT TGCAATGGAA TCGCTTAATT GAGCGGCATC AAGTGACGAT TTGGGTCTCC
GTCCCCGCTA TCTTGGAGAT GTTGCTCTCT TGCACTCAAG CAGGGCAATT ACACTCACTT
CGTCTGATTG CCCAAGGGGG GGATTACATC AAACCTGCCA CCATCGCCCA ATTACGCGCT
GGTTCAAATC CGCCGCGGTT GATCTCTTTG GGCGGTCCTA CCGAGACGAC GATTTGGAGC
ATCTGGCATG AGCTGACGGC AGATGATGTC AGCGTGATCC CATATGGTCG GCCGTTGGCG
GGAAACCGTT ATTTCATTAT GGATGAGATA CAACGCCATG TACCGCAAGG TGTGGTCGGC
CGTATCTTCA CCTCTGGGGT CAATTTAGCG CAAGGTTATC TTGAAGACGG CGAACTGAAA
CAAACCGATT TTGTCACCGT ATTGGATGAG CATGGCCACC CTGTGCGCGC GTTTCGAACG
GGCGATCAAG GCTACTACCG CGCGGACGGC AATATCATTT TTGCTAGCCG CATCAATGGT
TATGTGAAAG TTCGTGGGGT ACGAGTGTCA CTGCCGGATA TCGAAAAGCA GCTGCAAACT
CATCCGGCGC TCGCGAGCGT GGTGGTGGTC GATTATGCGG ATACTAATGG AGATACCGCT
TTAGCCGCAT TATTTAGCGT TAAACCTCAG CAATCAGCAT CGAGTCAGGC GTTACGAGAG
TTTGCCAAAC AATCGCTACC GTCTTCGCAT ATTCCGAGTC GGTTTATTGC TTTAGAGGCT
TTACCGCTTT CTGCGAATGG TAAAGTGGAT CGCAAACAGT GCCAAGCGCA TGTTCAGCGA
CAATCGATCT CTGTTGAACC AGTAGGTCAA CCGAATCAAA GTCAACCTCT CTCACCACCT
ACCTTGTCAT CGGCTTCCTT GAGTGAGTTT GAACAGCGAG TCTGGCGACA GCATCAACGA
CATGGTGACG GACGCAATCA ATATGCGACC GCTTATCGAT TGAGCGGAAA AGTGAATATC
GCGCGCTTAA TCACAGCGCT CAGTCAGTTG CCCAATCATT TTCCAGTGTT AAACCGACGC
TATGTGCTTG ATGAGGCATC CGGCTTAACC TTGTACTCGG CGAAGCCAAC ACCGCTTGAG
ATCCATTTTG AGCATGTTGA GTCAATGGAT GAGGCGTTTG AACATCTTGT GCGATGGCAA
AATCAGCCGA TGGATTTAGC CAAGCAAGCC ACACTAAGTT TTTGCTTGTT GAGTTTGGGG
AGCGAAGAGC GAGTGCTTGG GGTGATAAGC CATCAAATTA TCAGCGAGCA ATGGGATTGG
CGGCGCGTAT TTGAGTGCGT AACCAATGGG TATAACCAAA TCGCCTGTGA CATCGATCCT
GTGATGGAGG GGGAGGATCT TTCCCTCGGC TTTACCCCTG TGATGCCGCA AACGCCATTA
TCCCAAGCGT TGTTGCCGTG GTTACAGCCT GCGAGCCACG CTACATGGAT TGAGCAGAGC
TTGCCGAGCG CAAATAGCGC CATCAATACG CTTTGCAGTC GTAAATATCG GATTGCCCTA
CACAGCAGCG TACTGGCGGA GCATGGTTTA GCGCAGCCGG ATAAGCAGGA AGTGCTTGCA
CTGATCGCCG CGTTATTTGC TCGCTACCTT GCCGCAAGTG CGAAACTTGG CCAATTTGAG
CTTTACGTTC CGCATGATGT GGAGCGCAAA ACGCGTGAGT TGAATGGTTC TATGATTGAA
AGCCAGTTGG TGCATATCGC CCTTAAAGGC TTTGAGCGTC CGCTTTCGCA ACTGAGCCAA
GAGATCTTAG ACGCTATGCG CCAGCCGTTA ACGGGGGGAG TCGCTAGCGA AACTCACGCC
TCTGCCGCAG CCTTGGTGAC TTGGTTAGTG GATCCTTCAG TGCATCTACA ATTGGAGGGC
TTGCGCTGCG AAAAATTACT TTTTGCAGCC ATGCACCCCA AATTTGAAGT CGCCTTGGGG
GTTGGGCTTA ATTGCCAAGG TGCCCTAGTA CTTGAGCTGG CGTTAGATGC CACGGTTTCC
CCCCATGTCG GAGCCTACTT GCTTGAGCAA TTTGTCGCTG CGATAGGTGG GCGAACAATG
CCTTCTTCGA CAACCTCATC CTCTCATGTC TCAGCCATTG AGTTGACGTC AAACAATCCG
CCGACCTCAA ACAATGCGCA TGCGGCGTTG GCAGAGTCTG AGCTTGAATT GAGCGCTGTA
AATTCCTCTG CGGTTGAAGA GTGCATTTTG GCTGAGTTTC GCTCAGCACT TGGTGTTGCC
GAGATGACGG CAGAGGATGA TTTCTTTGAT TTTGGCGGAC ATTCCCTGAT CGCAACGCGA
GTCATTGGTC GCTTGTTGAG CGAGCAAGGT ATTGAACTGC ACATCAATGA TATGTTTAGT
TTCCCTAATG CCAAGCAACT GGCGCAGCAA GCCGTACTTC ACCGTAAACC CACCAGCACA
TCATTCGCAG TGAGTGAGGT GGTCGAGTCG TCCAAAGCGC CTTTGTCGTT AGCACAAGCC
TCTTTATGGA AGGCGATGAG CAAATACGCC AAGTTTGGTT TGACCCACAT CTTCAATCTT
CCGTTTGCGC TTAAATTTTT AGATGAGGTC AATGAGCAAG CATTTGGTGA GGCTTTTCAC
TGGCTTTTAC TGCGTCATGC TGGGTTACGA ACCCACTTTG GCCTAGAAGA TGGGCAGCCT
TACCAGCACG TGATCGCAGC CAGCAACATA GAACATTACC AGTGGTTCTG GACGTCTAAA
GATAACGCCG CCCAATCCGT GGCCAGACTA CTGGCGCAAG AGGCCGAGCA CACCTTTGAC
CTGAGCCAAG AATTGCCACT TCGACTCAAT TTCGTACGTG ATGAACAGAC GGGGACGCAA
TATCTTTCAC TTCTGTTCCA CCATATTGTG TTGGATGAGT GGTCGATCAA TATTTTGATG
GATGAATTAG CACAGGTGTA TCAACACAGT GTGCAAGGTA CTCGTCCACA GTGGCAAACG
GAACCCTTAC CTTTCCATGA GTTTGCTCGC AAGCAGCGTT CTTCGGCATT CAATCAAACG
CATCTTAACT ATTGGTTAAC CAAGTTTGCC GGTGTGCCTT GGGCACAGCC TCTGTTTGCT
GCGGATCATC CTTTAAGTAA CAGCACTGGC GTCGATCTTG GAGAAGGCGG CTGGGTCGAA
ATAAAATTGC CGAAATCAAC CATGGTATCG CTGTATCAAT TGGCTAAAGC ACGCCATGCT
TCGTTGTTTA ACGTGATGTA TGCGGCGATT TCTGCGTCGG TACATTGTCT CGGCGCACCA
GAAAAGCTGC TGGTTGGCAC ACCTGCTTCC GGTCGGCTGG ATGCCGAGTT TTTCGACACA
GTCGGTTATT TCACTACCAT GGGCGTTCAG TTGGTGGATT TCACGAAAGT ACAAACGGTG
TGGCAACTCA TCGAGCAAGT GAAAAACAGC ATTAACCAGT CGATGCCATA CACAGATATT
CCGATTGACC TGATTGAAGA AGGGCTCAAA GGTGTTGAGC ATGAGACGGA AGGTCACATG
TTTGAGGTCT TTATACAACT GCATGCAAAA AATAAGCTGC ATGGAGAGCT ACTGTTGACA
GAAGGGCATG CGATCCGCTT CCAACAAGTC GATCCCGATA AAAGTGAATC CGGCTTAGGT
TTACAGTTTG AAATTTTAGA AGAGAGGATC GAGCAAAAGC AGACGTTGAG AGTCATGATG
AGTTATATGT CGAAACACTA TAGCCCAGCT CAAGTCGCTC TGTTGACCAA GGTAACCAGT
GGCATGTTTG AGCGGTTTTC CGATTGTATT GCACAAGATA TTGCACTGCC GACGCTGAAA
AAGCAGGTGA GGCAGCTTGA AGATGAAGCT TGTCGCTCTC CGTCCATGGG GTAG
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| Protein sequence | MGLKMKEMTA MQAAYWLGRQ HDCLLDGVAA HLYAEFDGQA LNRQALTEAV RALYAKHPML
RLAITKDGQQ KILPLSTFHQ LKVDDLSQWK PDEVESFVHT KRQRMTHQML DLTQGNPIEI
SLTLLPEGKH RLHIDADMIA CDAQSFRLLV DDLTSLYLEA IEHRLEIIES DVVTFFQYLD
AQQADRALAK RKEVDKKWWQ ERLATIPAEP SLPYQPVPTD AVSANSQRFA HWFTPVERKG
LAEVARQHHL TLTQLTLALF SQVIANACQE RQFRLNVPTF HRGNRSLDIE HTIGDFSNLL
IFSADVGTTQ TLLSLCQQTA NQLHQLLRHE SYSGVSVMRD LSRKQGGVQR SPIVFTSGME
MRDEEIFSDH VTQHLGRMNW VISQGAQVTL DAQIAPAYEG ILLNWDVRME NFADKDITAL
FAHYVDLIRC VALHPEMMQQ SVQQIDAQLG YARRESIQEM PLTPLQQAYL LGRSTQIALG
GVAMHEFREY RGHIDTQSLH SRLLYLVEHI PALRTRIDQE KWIQWVSPCI ALNWQAIDLQ
HLSREQALLA VEPVRQQYQQ RMHDLTRSPW QICVVQLPIE EQEEFSSIVL TSFDALIVDG
RTHALILAAL LGSEEPDITQ VVQNARDTQS ISPQFASKKA QDEAYWKSKL HPDCPPPALP
WKQALETITT SRYARESLQI PKESVGKLNR CGIENGLFLN SLLTATILDV LSYWTTEIGM
RVGFPVLIPS SNAIDGNESS FVILEHEKST LSLLSQASKL QREMLEALEH LAFSGVDLNR
LLMNQAPQAL VLPVVLTNGL SWKTLNPEDA VTLFDGVTQT PQVALDIRLT YDEQKNLIIS
FDYALAVLET ELIREMLSAL HHRLSQITSS ASLAAPLEPC IDLSHYRFNS DESASHDCDF
LAKLAQQLFV RTEDKTAVIC GEQTLSYAQL GEQVQRVMWQ LKARGLTTGN VLAICLPRSV
EHIVISLASA LSGIIWVPID AASPKERLNY LLENCHADLV VMDKPCEFGN VIAFDALIEP
VLFADGVPDV TPLDQLSRLS QSQQTAYYLY TSGTTGKPKC VVVNNQATSN VIGQTGQAWH
LTSEDVVMSV TPLHHDMSVF DLFATLSFGA TLVLPAGHEE KDALQWNRLI ERHQVTIWVS
VPAILEMLLS CTQAGQLHSL RLIAQGGDYI KPATIAQLRA GSNPPRLISL GGPTETTIWS
IWHELTADDV SVIPYGRPLA GNRYFIMDEI QRHVPQGVVG RIFTSGVNLA QGYLEDGELK
QTDFVTVLDE HGHPVRAFRT GDQGYYRADG NIIFASRING YVKVRGVRVS LPDIEKQLQT
HPALASVVVV DYADTNGDTA LAALFSVKPQ QSASSQALRE FAKQSLPSSH IPSRFIALEA
LPLSANGKVD RKQCQAHVQR QSISVEPVGQ PNQSQPLSPP TLSSASLSEF EQRVWRQHQR
HGDGRNQYAT AYRLSGKVNI ARLITALSQL PNHFPVLNRR YVLDEASGLT LYSAKPTPLE
IHFEHVESMD EAFEHLVRWQ NQPMDLAKQA TLSFCLLSLG SEERVLGVIS HQIISEQWDW
RRVFECVTNG YNQIACDIDP VMEGEDLSLG FTPVMPQTPL SQALLPWLQP ASHATWIEQS
LPSANSAINT LCSRKYRIAL HSSVLAEHGL AQPDKQEVLA LIAALFARYL AASAKLGQFE
LYVPHDVERK TRELNGSMIE SQLVHIALKG FERPLSQLSQ EILDAMRQPL TGGVASETHA
SAAALVTWLV DPSVHLQLEG LRCEKLLFAA MHPKFEVALG VGLNCQGALV LELALDATVS
PHVGAYLLEQ FVAAIGGRTM PSSTTSSSHV SAIELTSNNP PTSNNAHAAL AESELELSAV
NSSAVEECIL AEFRSALGVA EMTAEDDFFD FGGHSLIATR VIGRLLSEQG IELHINDMFS
FPNAKQLAQQ AVLHRKPTST SFAVSEVVES SKAPLSLAQA SLWKAMSKYA KFGLTHIFNL
PFALKFLDEV NEQAFGEAFH WLLLRHAGLR THFGLEDGQP YQHVIAASNI EHYQWFWTSK
DNAAQSVARL LAQEAEHTFD LSQELPLRLN FVRDEQTGTQ YLSLLFHHIV LDEWSINILM
DELAQVYQHS VQGTRPQWQT EPLPFHEFAR KQRSSAFNQT HLNYWLTKFA GVPWAQPLFA
ADHPLSNSTG VDLGEGGWVE IKLPKSTMVS LYQLAKARHA SLFNVMYAAI SASVHCLGAP
EKLLVGTPAS GRLDAEFFDT VGYFTTMGVQ LVDFTKVQTV WQLIEQVKNS INQSMPYTDI
PIDLIEEGLK GVEHETEGHM FEVFIQLHAK NKLHGELLLT EGHAIRFQQV DPDKSESGLG
LQFEILEERI EQKQTLRVMM SYMSKHYSPA QVALLTKVTS GMFERFSDCI AQDIALPTLK
KQVRQLEDEA CRSPSMG
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