Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1727 |
Symbol | flaD |
ID | 5137844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1850752 |
End bp | 1851885 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640533184 |
Product | flagellin |
Protein accession | YP_001217666 |
Protein GI | 147675484 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTGA ATGTAAATAC CAACGTAGCA GCAATGACAG CTCAACGTTA TTTGACTGGT GCAACCAATG CACAACAAAC TTCAATGGAG CGTCTATCTT CAGGCTTTAA AATCAATAGT GCTAAAGATG ATGCTGCCGG CCTACAAATC TCTAACCGCT TGAACGTACA AAGCCGCGGT CTGGATGTGG CAGTACGCAA CGCGAATGAT GGTATTTCAA TTGCTCAAAC CGCAGAAGGC GCGATGAATG AAACTACCAA CATTCTGCAA CGTATGCGTG ACTTGTCACT GCAATCTGCG AACGGCTCGA ACTCCAAATC TGAGCGTGTG GCAATCCAAG AAGAGATCAC CGCACTGAAT GATGAGCTGA ACCGTATTGC AGAAACCACG TCATTCGGTG GTAACAAGTT GCTCAACGGT ACCTTCTCAA CCAAGTCGTT CCAAATCGGT GCTGACAACG GTGAGGCGGT CATGCTGACC TTGAAAGACA TGCGCAGTGA TAACCGCATG ATGGGTGGTA CCAGCTATGT CGCGGCAGAA GGCAAAGACA AAGACTGGAA AGTACAAGCG GGCGCGAACG ACATCACTTT CACGCTGAAA GACATCGACG GCAATGACCA AACCATTACC GTGAACGCTA AAGAAGGCGA TGATATCGAA GAAGTGGCGA CTTACATCAA CGGTCAAACC GACATGGTGA AAGCGTCTGT CAACGAGAAA GGTCAGCTAC AAATCTTTGC TGGTAACAAC AAAGTCACCG GTGATGTAGC CTTCTCTGGT GGTCTAGCGG GTGCTCTGAA CATGCAAGCG GGTACAGCAG AAACCGTTGA CACTATCGAT GTGACTTCAG TTGGTGGCGC GCAACAATCG GTTGCAGTTA TCGACTCTGC GCTGAAGTAT GTAGATAGTC ACCGTGCTGA ACTGGGTGCG TTCCAGAACC GTTTCAACCA TGCTATCAGC AACTTGGATA ACATTAACGA AAACGTGAAT GCTTCTAAGA GCCGTATCAA AGACACCGAT TTCGCGAAAG AGACTACAGC GCTCACCAAA TCGCAAATCC TGTCTCAAGC ATCAAGCTCT GTGCTGGCTC AAGCCAAACA AGCGCCAAAC GCCGCACTCA GCCTGTTGGG TTAA
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Protein sequence | MAVNVNTNVA AMTAQRYLTG ATNAQQTSME RLSSGFKINS AKDDAAGLQI SNRLNVQSRG LDVAVRNAND GISIAQTAEG AMNETTNILQ RMRDLSLQSA NGSNSKSERV AIQEEITALN DELNRIAETT SFGGNKLLNG TFSTKSFQIG ADNGEAVMLT LKDMRSDNRM MGGTSYVAAE GKDKDWKVQA GANDITFTLK DIDGNDQTIT VNAKEGDDIE EVATYINGQT DMVKASVNEK GQLQIFAGNN KVTGDVAFSG GLAGALNMQA GTAETVDTID VTSVGGAQQS VAVIDSALKY VDSHRAELGA FQNRFNHAIS NLDNINENVN ASKSRIKDTD FAKETTALTK SQILSQASSS VLAQAKQAPN AALSLLG
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