Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1584 |
Symbol | |
ID | 5137909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1704615 |
End bp | 1705058 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640533041 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_001217525 |
Protein GI | 147674517 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000628294 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAGTG AAGCGATAAG TAAAAAGGAA ATAGAAAGGG TGAAATTCGA ATCAAAAGAT CTGCACAAGC CTGATGAATA CTGGCGTGAG CACCTGACGG AAGAGGCGTT TTATGTCTGC CGCCAACAGG GGACAGAAGC ACCATACTCA GGTAAGTTGT TACACAATAA AGACACGGGT CTTTACCACT GTACCTGTTG CCAAAGCGCT CTGTTTAGCT CTGAAAATAA ATACGATTCG GGCTGCGGTT GGCCAAGTTT TGATGCGCCG ATTAATGAAC AGGTGATACG CTTTTTGGAT GACTTTAGTC ACGGAATGGT GCGTACCGAA ATTCGTTGTG CAGCCTGTGA TAGCCACCTT GGACATGTTT TTGAAGACGG TCCTAAGACG ACAGGATTGA GATTTTGTGT TAACTCGGTG TCGTTAATTT TCAACAAAAA GTGA
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Protein sequence | MVSEAISKKE IERVKFESKD LHKPDEYWRE HLTEEAFYVC RQQGTEAPYS GKLLHNKDTG LYHCTCCQSA LFSSENKYDS GCGWPSFDAP INEQVIRFLD DFSHGMVRTE IRCAACDSHL GHVFEDGPKT TGLRFCVNSV SLIFNKK
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