| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1568 |
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| Symbol | |
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| ID | 5136738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1686903 |
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| End bp | 1688750 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640533025 |
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| Product | putative peptidase |
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| Protein accession | YP_001217509 |
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| Protein GI | 147674907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000239383 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCGA CACATTACCT CAATCAACTT AACCACCGTT ATCTGAACAT CCATCGTGTC
AAAGAAGATT TCTTCTGGGA TACCTACATG GGGCTGAGTT ATGATCATGT GGGTTCCGCG
CAAGCACAAA CCGAGTGGAC TCAGTTTCTG AGCAATGGTG CGCGGATTGA GGAAATTCGC
CAGCAAATCG AATTGGCAGA ACAGATCACC GATAGCGAAG AAAAAGCGCA AACCTTAACG
GGCTTACAAG GCTGGCTCGC GATGTTTGAA AGTCATGCGC TGGAATCAGA GCAAGCGCAG
TCACTCAAAG CCGGATTAAT CCAATTTGAG GCCGATCTGT TTGAGAAAAA ACAGAAGCAT
GTGCTGACTT ATACCAACGA ACAGGGCGAA GCGGTAGAAG CCTCGATTGT CACTTTAGGT
TCCACGGTGC GTACTCATGA TCAAGAAGCA GTACGTCGCA GCGCCCATCA GGCTTTCTTA
GGCTTAGAAC AGTGGTTATT ACAAAATGGA TTGTTAGAGC TGGTGAAGCG TCGTAACCAT
TTTGCGCGCA GCTTAGGTTA TAAAACCTTT TTTGATTACT CGGTTGCCAA AAAAGAGAAG
ATGACCACTG AGCAACTGTT CACCATTTTG GATGATTTTG AACAGCGCAC GCGTGATCGT
CACTTCACTA GCTTAGCGGA ACTTGCACAA AGTAAAGGTG AGCAAGCGCT GCAAGGACAT
AACTTCATCT ATTCGTTTGC GGGCGATGTG ATGCGTGAGC TGGACCCTTA CGTGCCATTT
TCACAATCGC TGCGTCGTTG GGTGGAGTCT TTTGGTCGCC TCAATATTGA ATTTAGTGGC
GCTGAGCTGA CCCTTGATTT GCTGGATCGT AAAGGTAAAT ATCCAAACGG TTTCTGCCAT
GGGCCAATTC CGGCGTTTTA CGACCAAGGT CAGTGGGTCG CGGCGAAAGT TAATTTCACC
AGTAATGCTA AGCCAGATCA GGTAGGCAGT GGTTACGATG GCATCAACAC CTTGTTCCAT
GAAGGTGGGC ACGCGGCGCA CTTTGCGAAT GTGAAGATGA ACGCGCCGTG TTTTTCACAA
GAATTTGCAC CCACTTCGAT GGCGTACGCT GAAACGCAAT CCATGTTTTG CGATAGTCTA
TTGATGGATG CTGACTGGTT GAAAACCTAT GCCAAAGATG TACAAGGTAA CCCAGTGCCA
GATGAGCTCA TCAAAGCCAT GGTATTTAGC CGCCAACCGT TTAAAGCTTA CGAAGAGCGC
AGTATTTTGC TCGTGCCGTA TTTTGAGCGA GCACTGTATG AACAGAGCGA GGAAGAGCTG
ACTGCAGAGC GCGTCACTGA ACTGGCCAGA GCCACTGAAA AGCGGATTAT CGGCCTTGAA
TGCAGTCCGC GTCCGCTGAT GGCGATCCCG CATCTGTTAT CCGATGAATC GGCGTGTGCT
TATCACGGTT ACTTGTTGGC GCACATGGCG GTGTACCAAA CTCGCGCTTA TTTCCTTGGG
CAGTTTGGTT ATTTCACCGA TAACCCAGCG ATTGGGCCAC TACTGGCGAA GCATTATTGG
CAGCAAGGCA ATGCACTTTC TCACAATGAC ACTATTGTGA ACCTCACTGG TGAAGGCTTT
AATGCTCGCT ATCTTGCCGA TGCCTGTAAC TTAACTCCGG ATGAAGCATG GCAAAAGCAG
CAGCACAAAA TGGCGCAATT GGCGACGCGT GAGCAAACCA AACCCGCTTC ATTAAATGCG
CAGATTCGAG TGATTGATGG TGCCACTGAG CTGGCTTCTA ACCGTGATTC GGATGAAGAG
ATGTGCCGCC AATTTGAGGC GTACATTGCC AAACATTACG GTTGCTAA
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| Protein sequence | MSATHYLNQL NHRYLNIHRV KEDFFWDTYM GLSYDHVGSA QAQTEWTQFL SNGARIEEIR
QQIELAEQIT DSEEKAQTLT GLQGWLAMFE SHALESEQAQ SLKAGLIQFE ADLFEKKQKH
VLTYTNEQGE AVEASIVTLG STVRTHDQEA VRRSAHQAFL GLEQWLLQNG LLELVKRRNH
FARSLGYKTF FDYSVAKKEK MTTEQLFTIL DDFEQRTRDR HFTSLAELAQ SKGEQALQGH
NFIYSFAGDV MRELDPYVPF SQSLRRWVES FGRLNIEFSG AELTLDLLDR KGKYPNGFCH
GPIPAFYDQG QWVAAKVNFT SNAKPDQVGS GYDGINTLFH EGGHAAHFAN VKMNAPCFSQ
EFAPTSMAYA ETQSMFCDSL LMDADWLKTY AKDVQGNPVP DELIKAMVFS RQPFKAYEER
SILLVPYFER ALYEQSEEEL TAERVTELAR ATEKRIIGLE CSPRPLMAIP HLLSDESACA
YHGYLLAHMA VYQTRAYFLG QFGYFTDNPA IGPLLAKHYW QQGNALSHND TIVNLTGEGF
NARYLADACN LTPDEAWQKQ QHKMAQLATR EQTKPASLNA QIRVIDGATE LASNRDSDEE
MCRQFEAYIA KHYGC
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