Gene VC0395_A1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1551 
Symbol 
ID5137005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp1668366 
End bp1668956 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content45% 
IMG OID640533008 
Producthypothetical protein 
Protein accessionYP_001217492 
Protein GI147673509 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.494685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAC GAAACGATCA TACCCGAGAA GAGCTGGTGG CTCTCACCTT AGATAGAGTC 
AAACAGTTCC TCGATACTCA CTCCTATCAT GAGCTGAGCT TACGTAAAGT CGCCACTATG 
ATTGGCTACG TGCCCAGCAC CTTAGTCAAC GTGTTTGGCA ATTACAATTT GTTGCTATTG 
CATGTAGTGG CGCAAACCCT TGATGAATTG GCGCAAGAAG CCCAGCAAGC TGTGAAATCC 
ACCACTTATC CGAAAGATGC ACTCTATCAA CTGGCTTATT GCTACCATGA TTTTGCGAAA 
AGAAATCCTT ATCGCTGGCA GTTAATTTTT GAACACAATA TGAATGGGGA GATGCTGCCC 
GAGTGGCAAG CTCAACGCAT TAATAACATG ACCAGCATGT TAGAAGATCT GCTGAAAGTG 
ATTGCGCCTT TGCGTTCAGA GCAAGAAGTG TTGCAGGCGA GCCGCGTATT GTGGTCTGGC 
GTGCATGGCA TCACTATCTT GAGTGTCGAT GATAAATTTT TTGCCAATGA ACCGATTGAT 
GGTAATGCTT TGATTAATAA TCTGCTGAAT CACTATCTGG CTAACTGGTA A
 
Protein sequence
MARRNDHTRE ELVALTLDRV KQFLDTHSYH ELSLRKVATM IGYVPSTLVN VFGNYNLLLL 
HVVAQTLDEL AQEAQQAVKS TTYPKDALYQ LAYCYHDFAK RNPYRWQLIF EHNMNGEMLP 
EWQAQRINNM TSMLEDLLKV IAPLRSEQEV LQASRVLWSG VHGITILSVD DKFFANEPID 
GNALINNLLN HYLANW