Gene VC0395_A1425 details

Gene Information

• Locus tag: VC0395_A1425
• ID: 5136355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 1527012
• End bp: 1527584
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640532883
• Product: hypothetical protein
• Protein accession: YP_001217368
• Protein GI: 147674857
• COG category: [R] General function prediction only
• COG ID: [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA
• TIGRFAM ID: [TIGR02292] yecA family protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.0990149
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACCT TACAAGAAAT CCTGCAGCAG CCAGAATTAG AAAACAAACT CCTCAATCAA 
GCTAAAACCG TCGGTTTTGT TACCGCTATG GCTTGCTGTC CTAATGTCTT ACCCCCTGAA 
GAATGGCTCC CCTTCTTATG GGGTGGAGAA GAGATTGCAC CTTTTTCGGA TCCTATCCAA 
TTAGAAAACT ATTTCGAGCA CATCATCGCA CTTTGGAATG AAACACGATC TCAGCTACTA 
GAAGGCAACT GGCAATGGCC AACTGGCTAC TTGTTGGATG AGGCAGAAAT CGTGAATCAA 
GAGGTACGTG ATTTTTGCGA GGGGATGCTA CAAGGTTGGC AATTAGCGCG TGATGATTGG 
GAGGTGTTGA TGCCAGAAAA TAGTTCCGAT AATACCCTGC TTGGTGGCGT GCTTCTTTCA 
TTAAGTATGC TCTACGATCC TGAAACATCG ATCGCCACAC TTTATGAGCA AGGCTTCACC 
GGTTTAGAGC AATTTGCTGA AATTTATCAT GCGATTCCAG TGATGTTGTG TGGAATCACA 
CAACGTGGTG TCACGTTAGC TGAAGCTCAG TAG 

 

Protein sequence

MQTLQEILQQ PELENKLLNQ AKTVGFVTAM ACCPNVLPPE EWLPFLWGGE EIAPFSDPIQ 
LENYFEHIIA LWNETRSQLL EGNWQWPTGY LLDEAEIVNQ EVRDFCEGML QGWQLARDDW 
EVLMPENSSD NTLLGGVLLS LSMLYDPETS IATLYEQGFT GLEQFAEIYH AIPVMLCGIT 
QRGVTLAEAQ