| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1410 |
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| Symbol | cry1 |
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| ID | 5137694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1507892 |
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| End bp | 1509277 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640532868 |
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| Product | RNA-binding cryptochrome Cry1 |
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| Protein accession | YP_001217353 |
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| Protein GI | 147674040 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | [TIGR02765] cryptochrome, DASH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAAAA AAATTGGCCT GTACTGGTTT ACCAACGATT TACGAGTGAA CGATAACCCG
CTACTTGAGC AAGCCTCGCA GCAAGTGGAT CGCTTGATCT GTTTGTACTG TTATCCCTCG
ATTACGCCAT TTTTGGCGCG CTACGCCCAG CAAACACAAT GGGGCGAAGC CAAAAAAAGG
TTTCTCAACC AAACCTTGGC TGACTTAGAT CATTCGCTCA GTACGCTAGG CCAAAAGCTT
TGGGTGACGC CACTTTTGCC CTATCAAGCG CTGCGCCATC TACTGACTCA AGTCGAGATT
ACGGATATTT ATGTGGATGC AGTGGCGGGC TCAGATGAAC GCCAAGCTAT CGCGCGCATT
CATCAGGACT TTTCTTCTGT GCACATCCAT CAGCAAGCTC TGCACAGCTT ATTGAGTGAG
CCGCAGTTGC CGTTTGCACT TGAGGCGCTA CCGAGCACCT TTACCCAATT TCGTAAGCAA
GTAGAAACGA TCTCCCTCTC TGCGCCGATG GGCTATCCGC ATGTTTTGCC ACCCATTGAG
CAAGGCTGGC AGTTGCCTTT GATGGATATT GTTACCGAGC CGAATCACAG CGCCTTTGTC
GGTGGTGAGC AAGCAGGGCT GACGCATTGC CAAAACTATT TCTCCTCCCT GCTCCCCAGT
CGCTATAAAG AGACGCGCAA TGGGTTAGAC GGCATGGATT ATTCCACTAA GTTTTCGCCT
TGGCTCGCGC TCGGCGCGGT TTCGCCAAAA ACCATTTATG CCATGTTGCA GCGTTATGAA
GCTGTACATG GCGCGAACGA TTCCACCTAC TGGATTTTCT TTGAGTTACT GTGGCGTGAA
TATTTTTACT GGTACGCGCG GCGCTATGGC GCAAAACTGT TTCGCTTCTC TGGGATTGGC
GAGAAAAAAC CGCTCACCAG TTTCTATGCG CAGCGCTTTT TACAGTGGAA GCACGGAGAA
ACGCCTTTCC CCATTGTGAA TGCCTGTATG CGGCAACTGA ATCAAACGGG TTACATGTCC
AACCGTGGTC GACAGTTAGT CGCCAGCTGT CTAGTTCACG AACTAGGTTT AGATTGGCGC
TATGGTGCCG CTTATTTTGA AACCCAGTTA GTGGATTACG ATGTCGGATC CAACTGGGGC
AACTGGCAAT ATTTGGCGGG AGTCGGAGCC GACCCACGCG GCTCGCGGCA ATTCAACCTC
GAAAAACAGG CGCACACTTA CGATCCAAAG GGCGAGTTCG TTGCCAAATG GTGCGGAACG
GCTTGTGACA AGCTAAATGC TCTCGAAAAT TTGGCGCTCG ACAGTGTCGA TATGGTTGAC
TGGCCAATCG CCGCCAGCGC GTATCTTCTT ATCCATCATC CTCAAAATAA GGAAAGCTCA
TCATGA
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| Protein sequence | MSKKIGLYWF TNDLRVNDNP LLEQASQQVD RLICLYCYPS ITPFLARYAQ QTQWGEAKKR
FLNQTLADLD HSLSTLGQKL WVTPLLPYQA LRHLLTQVEI TDIYVDAVAG SDERQAIARI
HQDFSSVHIH QQALHSLLSE PQLPFALEAL PSTFTQFRKQ VETISLSAPM GYPHVLPPIE
QGWQLPLMDI VTEPNHSAFV GGEQAGLTHC QNYFSSLLPS RYKETRNGLD GMDYSTKFSP
WLALGAVSPK TIYAMLQRYE AVHGANDSTY WIFFELLWRE YFYWYARRYG AKLFRFSGIG
EKKPLTSFYA QRFLQWKHGE TPFPIVNACM RQLNQTGYMS NRGRQLVASC LVHELGLDWR
YGAAYFETQL VDYDVGSNWG NWQYLAGVGA DPRGSRQFNL EKQAHTYDPK GEFVAKWCGT
ACDKLNALEN LALDSVDMVD WPIAASAYLL IHHPQNKESS S
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