Gene VC0395_A1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1215 
Symbol 
ID5137378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1278800 
End bp1279249 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID640532673 
Producthypothetical protein 
Protein accessionYP_001217159 
Protein GI147674760 
COG category[R] General function prediction only 
COG ID[COG0645] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.236602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGATAG CAAAATGCAA CGAACCTCAA TCTAAGTTAG TATCTCTCGG CACAATTGAC 
TACTGTGAAT CAAGTATGCG ACCTCATTTA ACCCTTATTC GCGGTTTGCC AGGTTCGGGG
AAATCAACCT TGGCGAAGAC CTTGTCTGCT GTCCATCTGG AAGCAGACAT GTATTTTGTT
AATCCACAAG GTGAGTACCA TTTTCGCCCC GAACACTTGG CGCAAGCCCA TGAATGGTGT
CAACAACAGA CGGAATACTG GCTGCAACAA GGCAAAGACG TGGTGGTATC GAATACTTTT
GTTCGGCATT GGGAGATGGC GGTATACCGA AAACTTGCCC GACAATATCG AGCTAAGCTG
ACGATTCTGG TGTGTCGAGA GCGTTATCAA AACGTGCATG GGGTGGATGA AGCCACTGTC
GAACGCATGC GTCAACAGTG GCAAGAGTAG
 
Protein sequence
MSIAKCNEPQ SKLVSLGTID YCESSMRPHL TLIRGLPGSG KSTLAKTLSA VHLEADMYFV 
NPQGEYHFRP EHLAQAHEWC QQQTEYWLQQ GKDVVVSNTF VRHWEMAVYR KLARQYRAKL
TILVCRERYQ NVHGVDEATV ERMRQQWQE