| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1208 |
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| Symbol | |
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| ID | 5136604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1270194 |
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| End bp | 1270970 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640532666 |
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| Product | hypothetical protein |
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| Protein accession | YP_001217152 |
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| Protein GI | 147675751 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000699317 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATGGC GTTTTTGTTT GACAACAGTA CTGGGTGTTG TTCTGAGCTT TAGTCCTAGT
GTGAAGGTTC AGGCTCAGGG GCTGGAATCG TTAACGTACT ACACAGAAAA CTATCCACCA
CTGAATTTTG CTAAAGAAGA CGGTAAACCC GCGGGGATTG CGGTGGATTT ACTCCTAGAA
GCCGCGGCGG CGGTTAATGT CACCTTGAAC TTGGATCAGA TTTTTGTTCA ACCTTGGCCA
CGTTCTTATC GGTCGGCGTT GTTAAAACAG GATGGAGTAC TTTTTTCTAC GACACGTACA
ACACATCGTG AAAATTTATT TAATTGGGTC GGCCCTATTG CCGATATCAA AGTGGTAGTG
CTGGCACGAA AGTCGAGTCA GATCAAAGTG AATGACCCTA TCGAGTTAGG AAATTACCGA
ATTGGTGTGA TCCGTGATGA CATTGGAGAA CAGCAATTAC TGCAACTCGG TGTACCACGG
GAATCCATGG TAGAAGGTTC CACCGTCAGT AGCTTGGCCG AGCAATTGCT AAAAAAACGC
ATTGATCTGC TCGCTTATGA TGAAAGAACC GCACTTTGGT GGATGAGCCA AGATAGCTAT
CCCGTTGAAG AATTTGAAAC GGTATACGTT TTGATGCAAG GTTCACTGTA TTACGCATTT
AACAAAAACA TAGATAAGTC GGTATTGAAC GATTTACAAA AAGGCATTGA GCTGATCAAA
AACAGCGTCA ATGAGAATGG TGTAACTCGT TATCAGGCAA TACTGGACAA ATATTGA
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| Protein sequence | MQWRFCLTTV LGVVLSFSPS VKVQAQGLES LTYYTENYPP LNFAKEDGKP AGIAVDLLLE
AAAAVNVTLN LDQIFVQPWP RSYRSALLKQ DGVLFSTTRT THRENLFNWV GPIADIKVVV
LARKSSQIKV NDPIELGNYR IGVIRDDIGE QQLLQLGVPR ESMVEGSTVS SLAEQLLKKR
IDLLAYDERT ALWWMSQDSY PVEEFETVYV LMQGSLYYAF NKNIDKSVLN DLQKGIELIK
NSVNENGVTR YQAILDKY
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