Gene VC0395_A1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1205 
Symbol 
ID5137041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp1267450 
End bp1268139 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID640532663 
Producthypothetical protein 
Protein accessionYP_001217149 
Protein GI147674541 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0604166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAA TTTTTATTGT CGTCATACTG TTAGTTCTGT TCTTTTTCGT GATTCAAAAA 
TATGTCATTC GTCACGATGA CACAAAGGAC TATGCCTATA AAAAGAAAGG CCCACTACTG 
GATATGAAGG AAAGCGCTTT CTTTAACGCA CTAGTGAGTG CGGTTGGCGA TCATGGCGTG 
GTCTTAGCGA AAGTGAATAT GACCAATGTG ATCACTCCAA GTAAAGTCGC GAACAAAAAG 
CACTGGTTTA TTGCTTATAA CAAGATCTCA AAAAGCTACT TTGACTTTGT GGTGTGCGAT 
GCAAGAACGC TTGAACCCAG AGTCGTGCTC GAATTGGATG ATGGGAAAGA GCTGCAAAAG 
GGCAAAGTAG AACGAGAAAA GTTGCTGCTG CACGTTTGTA AATCGGCCAA TATCCCATTG 
ATTGGCACCA ATATTCGCAT GAGTTATCAA GTTGGCAAGT TAAGACGTTT ACTCGCCGCG 
CACATCGATT TAATTCAAAC CGAGCAGGAA GTGCGTTTTT GTAAACGCTG CGGCAGTCCT 
ATGGTGATTA AAGTTGCCAC ACAAGGAGAA TACCGTGGGA GACGATTCTT TACCTGTAGT 
CGACAACCAC ACTGTTCCTA CACGGAGAAT TACAACGTGG TTTATGAATT TGAAGAAGAG 
GACAACGCCA GCAATCCCAG CGTTAATTAA
 
Protein sequence
MVEIFIVVIL LVLFFFVIQK YVIRHDDTKD YAYKKKGPLL DMKESAFFNA LVSAVGDHGV 
VLAKVNMTNV ITPSKVANKK HWFIAYNKIS KSYFDFVVCD ARTLEPRVVL ELDDGKELQK 
GKVEREKLLL HVCKSANIPL IGTNIRMSYQ VGKLRRLLAA HIDLIQTEQE VRFCKRCGSP 
MVIKVATQGE YRGRRFFTCS RQPHCSYTEN YNVVYEFEEE DNASNPSVN