| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1190 |
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| Symbol | |
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| ID | 5137215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 1252723 |
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| End bp | 1253601 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532648 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001217136 |
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| Protein GI | 147674953 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTC GTTACATGAA GTACTTTGCG GCCGTCGCAG AGGCAAAACA TTTCACGCGT
GCGGCGGAGC AACTTGGCAT AGCCCAGCCA CCTTTAAGTC AGCAAATCAA AAAGTTAGAA
GAAGAGCTTG GCGTCAATCT TTTCAAACGA TTATCACGAG GCGTTGAGTT GACGCCCGCC
GGTGAGCTTT TTTATCAGGA TACGACCAGC ATTCTCCAAC AAGTTGAACG AGCCAAAGAT
CGAGTTAGAC AAAGGGCAAG GGGAGAGCAT CTTGAACTGC GTTTAGGCTT TGCTGCCTCA
ACCGCCAGCA GTTCTGTGGT ATTAGAAAAA GTGTGCCAAC TGCATGAAAC GATTCCAGAT
CTACAATTGA TCGCCGTAGA ACATCCGATG CCAGAGTTGG CTAGAATGAT CCAAGAAAAA
CAGTTGGATA TCGCATTTAT GCGTTTGCCT TGTTATGCCA GTGAAGCGCT ACGGCGAAAG
ATATTATTTG ATGACCCATT TGTGGCGGTG ATCCCCGCCG TGCATACGTT AGCGGAAGTG
GAAAAGATTC AGCTCATCCA GCTTAACCAT GAAAATGTAT TGATGTTTCC ACGAGAGGTC
GGCCCGGCCC TGTACGACAA TATTGAAGCC GCATTCAGCG CAGCCGGTGT CAATATCGCG
CGATCGTATG CTGCGCCACA GTTAAGAACG GCAATTACTA TGGCGCAAGC TGGGTTTGGC
ATTGCGATCG TTCCTTTATC GCTCACAGAT CATCTTGACC ATTCGGTGGT GGTGAAGACG
ATTCAAGATA TGCCGTTTGT CAGTCAGGTT GCTATCGTTT CTGATGCCGG ACATCACCAC
CCCTTACTCA ATCGCTGCAT TGCGTGTATG GGGGAGTGA
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| Protein sequence | MEFRYMKYFA AVAEAKHFTR AAEQLGIAQP PLSQQIKKLE EELGVNLFKR LSRGVELTPA
GELFYQDTTS ILQQVERAKD RVRQRARGEH LELRLGFAAS TASSSVVLEK VCQLHETIPD
LQLIAVEHPM PELARMIQEK QLDIAFMRLP CYASEALRRK ILFDDPFVAV IPAVHTLAEV
EKIQLIQLNH ENVLMFPREV GPALYDNIEA AFSAAGVNIA RSYAAPQLRT AITMAQAGFG
IAIVPLSLTD HLDHSVVVKT IQDMPFVSQV AIVSDAGHHH PLLNRCIACM GE
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