Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1187 |
Symbol | |
ID | 5135935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1249507 |
End bp | 1250073 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532645 |
Product | ankyrin repeat-containing protein |
Protein accession | YP_001217133 |
Protein GI | 147675624 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGCATT CACTATGGCA AAGGAGAGGA ATGATGAAAT GGCTATGGCA GCTCGCCCTA ATCGGCTTAT TAGTACTATC CCCTTTTAGA TTGAGTGTAG CGGCTTCGGA GCCGTCTGGT ACTGCACGGT CAGATACAAG CCAAGAGTAC CAGTCTCTGA TCTCACTCTT TTTCGCAGCA GTAAGGACAG GGAATGACGA AGTTGTGAAT GAATTTCTCT CCGCTGGATT TCCGATTAAT CAACGAAATG CGGAGAGCTA TACCGCATTA ATGGTTGCAG CCTACCAAGG CAACGCACAA ACCGTGGAAC TTTTACTACG CTTTGGAGCG AATGCTTGTT TGCAAGATAA ACGTGGTAAT ACGGCTTTAA TGGGAGCTCT ACTGAAGCGG GAAATCCAAA TCGCGAGAGC TTTATACCAA GCAGAGTGTG CGGATAACCT TCGCAATAAA GCGGGACTCT CGGTGCAAGA ATTTGCTGAG TTGTACGGTC AATCTGAGAC GTTAAAAGCG CTGCATCAAG AAAAATTGGC TGTGTCGTCT TCCACTCAAT CACGACCTCT CAACTAA
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Protein sequence | MGHSLWQRRG MMKWLWQLAL IGLLVLSPFR LSVAASEPSG TARSDTSQEY QSLISLFFAA VRTGNDEVVN EFLSAGFPIN QRNAESYTAL MVAAYQGNAQ TVELLLRFGA NACLQDKRGN TALMGALLKR EIQIARALYQ AECADNLRNK AGLSVQEFAE LYGQSETLKA LHQEKLAVSS STQSRPLN
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