| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1181 |
|---|
| Symbol | |
|---|
| ID | 5137419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1241125 |
|---|
| End bp | 1241946 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640532639 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217127 |
|---|
| Protein GI | 147674196 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.523374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTATTT TTTGGTTAAA AGCGTTAACC TCAGGTTTAT TTTATTTACC ACTGTCGATA
AAAAATGGTT TATGCCGCCT CGTGGCTAAG CCGATAAGTC GGAAAAAAAT GGCAGCGGCT
TTAACGCAAC TTAATTACGC GTTACCTGAT TTGAGTGACG TAAAAAAGCA GGCGATTGTT
GAGCAATCCA CGCGCTTATC ATTGAAGAAT TTACTCGGGT TTTGCCATCT TAAGCGTTAC
CAATATCAAG TTGAACAGCC TGACTTGGTT CAAGAGATCC TAGATAACCA AGGCGGCGGT
ATTATCGTTT GTCCCCATAT GGGCGTTTAC GATGGGGTGA CTTGGTGGCT TAACCAGCAA
GGTAAAAAAG CCGTCACTAT TTTTGGGGCG GGCAGCTCAG GCGATCGTCC AGATGAAAAT
GCCATGATCT CCCAAGCTGC GAAATTAGCC AGAGTTCCCT ATCTGCTACG CAAACAAAAC
TTGATGTTGG AGTTAGCACA GCGGATCAAA CAAGGTGAAT GGGTGGTGTT ACATATGGAT
ATGCGCACTG AAGGTGTGCC TGTTCGTTGG TTTGGGCAAG CCACACAATT GTCGGCAACG
CCTTTTTTCC TTGCGCATAA ACTCGCATGC CCGATCTATT TTCATTATGC GCTCAGTGAG
GGAATGACGC AGAGACTGCA TTTCTCGCGC TTTGCCTTGC ACCAAACCGA TGACTTAAGT
CGCAATATTG CGCAGGATGC GCAGCAGTTA GCCGACATGA TGCAGCAAGC GATCACCGCG
CATCCCGAGC AGTGGATCTG GCTTTATCGG CGTTTTAAGT AA
|
|---|
| Protein sequence | MRIFWLKALT SGLFYLPLSI KNGLCRLVAK PISRKKMAAA LTQLNYALPD LSDVKKQAIV
EQSTRLSLKN LLGFCHLKRY QYQVEQPDLV QEILDNQGGG IIVCPHMGVY DGVTWWLNQQ
GKKAVTIFGA GSSGDRPDEN AMISQAAKLA RVPYLLRKQN LMLELAQRIK QGEWVVLHMD
MRTEGVPVRW FGQATQLSAT PFFLAHKLAC PIYFHYALSE GMTQRLHFSR FALHQTDDLS
RNIAQDAQQL ADMMQQAITA HPEQWIWLYR RFK
|
|---|
| |