| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1125 |
|---|
| Symbol | |
|---|
| ID | 5136683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1184949 |
|---|
| End bp | 1185425 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640532583 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217071 |
|---|
| Protein GI | 147673044 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC AAACTTCTCC TGAATCCTTA ACGGATGGTG CTCATAGTAA AACCGACAGC
GCTTGGCCGC TCGCTTGCAA CCTTGAGCCG CGTTTGGTCT CACGTGGCCG TTGGCAAACC
ACGCAGTGGA TGTTGCACGG TTTCAGTTTA ACGCCAGAGG CGCAGAGTCA ATATGTCGCA
ACCTTGCACT TGTATCGTGA CGAGCGTACT GACTATCGCT TTAACCTCAG TTCACAAGCG
CCAAAGCTGT TCTTGGTTGC CGAAGATCCG ATTGAAGATC AGCCGCTTAA AGTCGTGCAA
TTGACCGCAT CGCAAGCCGT CGCCAGCCGC TATATGGACA GCGATTATCT GGTGCTGTCG
GCCGATATGC CGCTACCCGT TCAGGCGTGG ATGGAAGCCT ATATTGGTCG TCACGGTGAG
CTACTGGAAA TTCGCCGCAA GAAACGTGAA GGCGCGGGGA GGTCTTGTGG CAACTGA
|
|---|
| Protein sequence | MTEQTSPESL TDGAHSKTDS AWPLACNLEP RLVSRGRWQT TQWMLHGFSL TPEAQSQYVA
TLHLYRDERT DYRFNLSSQA PKLFLVAEDP IEDQPLKVVQ LTASQAVASR YMDSDYLVLS
ADMPLPVQAW MEAYIGRHGE LLEIRRKKRE GAGRSCGN
|
|---|
| |