Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1069 |
Symbol | rstA1 |
ID | 5137135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 1121711 |
End bp | 1122790 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640532527 |
Product | RstA1 protein |
Protein accession | YP_001217015 |
Protein GI | 147675657 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2946] Putative phage replication protein RstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.317105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC AGATTTTCAC TCTTGATGAA TTACAACTCG ATACAAACGC TTCTCCGTTT GTTTTTGTCG ATTATCTTGC TTGGTCGGTT CCTTATGCTT CATTCCGTCA CGCGCATAAG TCCGATTTGT CCTCGCTTAT CTGGGCGCCT CTTCCTAAGC CTGATTACCG TATGGCTCGC ACACCTGAGC AAAAAGAGAA GTTAATCGAG CTTTATAAGC AGAAGTGGAA CGTTGCCATG ATGGAACGCT TGGAGGTCTT TTGCCTTCAT GTTCTTGGTC TTCGTATGTC GCCTTGGCGC GATAAGGGGC TTTATGGGTA TGAAAACTCA TGCCATTTGA TGTCTAAGTA CTCCAATAAA CACGTGGGCT TTGTTGCGCT AGGGGGAAAC CGTAATACCT GTTACTTCCA AATTGAGGGA GTAGGGTGTC GAACCGTGTT AGAGCACACC TCTTTATTCC GTCTTCATTG GTGGCTCGAT TTATTAGGTT GCTCTCGTCT GTCTCGTATT GATTTAGCCG TTGATGACTT TCACGGTTTG TTTGGCCGTG AGTACGCCAA AAAAGCCTAT TCCGATGACG CCTTTCGCAC CGCTAGAGCG GGACGTGCCC CTAACGGTGG TGAGCGATTA GTCTCTGAGC CTAATGGCAA AATCATCAAT GAATCTTTCG AGGTAGGCTC TCGTGAATCT CGCATTTACT GGCGTATCTA CAACAAGGCT GCTCAGCTTG GTTTAGATAT GCACTGGTTT CGTAATGAGG TCGAGCTTAA AGATATGCCT ATCGACGTTC TGCTCAATAT CGAGGGGTAT TTTGCAGGTT TGTGCGCGTA CTCGGCCTCA ATTATCAATT CCTTGCCTGT CAAGGTGGTC ACAAAAAAGC GTCAAGTGGC GCTTGATATC CACTCACGCA TTAAGTGGGC TCGTCGTCAG GTCGGTAAGA CGTTGTTTGA TATTTCAAAG CATTTTGGTG GTGATTTGGA AAGGGTGTTT GGGGCGTTGA TTTCTAAGGA AATTCACGAC GATTCACTCA ACCTTCCAGA TTCTTATATG AAGTTAATTG ATGAAATTAT GGGTGATTAA
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Protein sequence | MKKQIFTLDE LQLDTNASPF VFVDYLAWSV PYASFRHAHK SDLSSLIWAP LPKPDYRMAR TPEQKEKLIE LYKQKWNVAM MERLEVFCLH VLGLRMSPWR DKGLYGYENS CHLMSKYSNK HVGFVALGGN RNTCYFQIEG VGCRTVLEHT SLFRLHWWLD LLGCSRLSRI DLAVDDFHGL FGREYAKKAY SDDAFRTARA GRAPNGGERL VSEPNGKIIN ESFEVGSRES RIYWRIYNKA AQLGLDMHWF RNEVELKDMP IDVLLNIEGY FAGLCAYSAS IINSLPVKVV TKKRQVALDI HSRIKWARRQ VGKTLFDISK HFGGDLERVF GALISKEIHD DSLNLPDSYM KLIDEIMGD
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