Gene VC0395_A1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1004 
Symbolcry2 
ID5136164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1041631 
End bp1043145 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content53% 
IMG OID640532462 
Productcryptochrome Cry2 
Protein accessionYP_001216950 
Protein GI147673506 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TCAATCTGGT GTGGCTCAAG CGTGACCTAA GGCTGACCGA TCACGCGCCA 
TTACAAGCGG CGTTAACTTC GGGGCGACCG ACGTTACTAC TCTATCTGTT TGAGCCAATG
CTGCTTGGCG ATGCGCATTA CAGCGAACGA CACTGGCGCT TTGTGTGGCA ATCATTGCAA
GCCATCAATC GTGATTTGGC GCAGAGCAAA GGGGAGGTGT TGATCGTCAC ATCCGATTGG
CAAACCTGCT TTGCACGTAT TGCTGAGCGC TACGCCATTG AGGCGATTTA TTCTCATCAA
GAAGTCGGTT TAGCCTGCAC TTTTCAGCGC GATCTTGCGC TGGCACAGTG GTGCCAGCAA
CACGACATCG TCTGGCATGA ATTTCCTTAT GCTGCCGTGA TCCGCGGGGC GCAAACCCGA
AAAAATTGGG ATGAACATTG GCAGCAAGTA ATGCGCTCCC CTTGCTGCGA TCCTGATTTA
ACACGCGCCA ATTGGCTGAA GCTGGATGCC GCAACGCTTG GTTTGCGCAG CGATATCCCT
GCCACATGGC AGAGTAAACA AGCGGGCATG CAAACTGGTG GCAGTGATAT GGCGTGGGCG
ACGCTGGAGG ATTTTTTCGT GCGTCGAGGG CGAGAGTATT ACCGCTCCAT CTCAAGTCCG
AGCTTAGCGC GCCACGCGTG CTCGCGGATG TCGCCTTATC TTGCGTGGGG AAATATCTCA
CTGCGGGAGA TGTATCAAAC TTTGCTCAAA CACTGGTCGG TAGCGGGATT TCGCCGCAGC
CTGATTGCGC TTTCATCACG TCTGCATTGG CACTGTCACT TTATCCAAAA ATTTGAATCA
GAATGTGAGA TGGAGTTTCG CTGCGTCAAC CGCGCTTATG ATTCACTCTT ACAGCAATCA
AGCGATGCCC CCGCCGCGCA GTTAGCGGCT TGGCAAACTG GGCACACCGG CATTCCACTG
GTCGATGCCT GTATGCGTTG CTTAATTCAA ACCGGATACC TCAATTTTCG CATGCGCGCG
ATGTTGGTGA GCGTGTTAAC TCATCATATG AATGTGGATT GGCGAGCGGG CGTGACTTAT
TTGGCGCAAC TGTTCCTCGA TTTTGAACCG GGCATTCATT ATCCGCAGTT TCAAATGCAA
GCAGGGGTCA CGGGTACCAA TACTATCCGC ATTTATAACC CGACCAAGCA AGCACAAGAG
CATGACAGCG AAGGGCAGTT TATTCACAAA TGGGTGCCAG AGTTGGCGCA AGTGCCTGTA
CCGCTGCTCT TTGAACCCTG GCTGATGACA CCGCTTGAAG CGCAGATGTA TCAAGTACCG
CTTGAGAGCC CTTACCTCAA GCCGGTGATG GATTTGGAAG CCAGTGCCAA GCAAGCACGG
GATCGCTTAT GGCAGTGGCA GAAACTGCCT GCGGTACAAG CCGAAGCGAT GCGTATCCTC
GCGCGCCATG TGCGGCAAGC TAAACCGAGA ACTTCGCCGC GCCAACCCAA CAAGCGTCAA
CCGGAGATGG ATTAA
 
Protein sequence
MEKINLVWLK RDLRLTDHAP LQAALTSGRP TLLLYLFEPM LLGDAHYSER HWRFVWQSLQ 
AINRDLAQSK GEVLIVTSDW QTCFARIAER YAIEAIYSHQ EVGLACTFQR DLALAQWCQQ
HDIVWHEFPY AAVIRGAQTR KNWDEHWQQV MRSPCCDPDL TRANWLKLDA ATLGLRSDIP
ATWQSKQAGM QTGGSDMAWA TLEDFFVRRG REYYRSISSP SLARHACSRM SPYLAWGNIS
LREMYQTLLK HWSVAGFRRS LIALSSRLHW HCHFIQKFES ECEMEFRCVN RAYDSLLQQS
SDAPAAQLAA WQTGHTGIPL VDACMRCLIQ TGYLNFRMRA MLVSVLTHHM NVDWRAGVTY
LAQLFLDFEP GIHYPQFQMQ AGVTGTNTIR IYNPTKQAQE HDSEGQFIHK WVPELAQVPV
PLLFEPWLMT PLEAQMYQVP LESPYLKPVM DLEASAKQAR DRLWQWQKLP AVQAEAMRIL
ARHVRQAKPR TSPRQPNKRQ PEMD