Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A1004 |
Symbol | cry2 |
ID | 5136164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 1041631 |
End bp | 1043145 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640532462 |
Product | cryptochrome Cry2 |
Protein accession | YP_001216950 |
Protein GI | 147673506 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA TCAATCTGGT GTGGCTCAAG CGTGACCTAA GGCTGACCGA TCACGCGCCA TTACAAGCGG CGTTAACTTC GGGGCGACCG ACGTTACTAC TCTATCTGTT TGAGCCAATG CTGCTTGGCG ATGCGCATTA CAGCGAACGA CACTGGCGCT TTGTGTGGCA ATCATTGCAA GCCATCAATC GTGATTTGGC GCAGAGCAAA GGGGAGGTGT TGATCGTCAC ATCCGATTGG CAAACCTGCT TTGCACGTAT TGCTGAGCGC TACGCCATTG AGGCGATTTA TTCTCATCAA GAAGTCGGTT TAGCCTGCAC TTTTCAGCGC GATCTTGCGC TGGCACAGTG GTGCCAGCAA CACGACATCG TCTGGCATGA ATTTCCTTAT GCTGCCGTGA TCCGCGGGGC GCAAACCCGA AAAAATTGGG ATGAACATTG GCAGCAAGTA ATGCGCTCCC CTTGCTGCGA TCCTGATTTA ACACGCGCCA ATTGGCTGAA GCTGGATGCC GCAACGCTTG GTTTGCGCAG CGATATCCCT GCCACATGGC AGAGTAAACA AGCGGGCATG CAAACTGGTG GCAGTGATAT GGCGTGGGCG ACGCTGGAGG ATTTTTTCGT GCGTCGAGGG CGAGAGTATT ACCGCTCCAT CTCAAGTCCG AGCTTAGCGC GCCACGCGTG CTCGCGGATG TCGCCTTATC TTGCGTGGGG AAATATCTCA CTGCGGGAGA TGTATCAAAC TTTGCTCAAA CACTGGTCGG TAGCGGGATT TCGCCGCAGC CTGATTGCGC TTTCATCACG TCTGCATTGG CACTGTCACT TTATCCAAAA ATTTGAATCA GAATGTGAGA TGGAGTTTCG CTGCGTCAAC CGCGCTTATG ATTCACTCTT ACAGCAATCA AGCGATGCCC CCGCCGCGCA GTTAGCGGCT TGGCAAACTG GGCACACCGG CATTCCACTG GTCGATGCCT GTATGCGTTG CTTAATTCAA ACCGGATACC TCAATTTTCG CATGCGCGCG ATGTTGGTGA GCGTGTTAAC TCATCATATG AATGTGGATT GGCGAGCGGG CGTGACTTAT TTGGCGCAAC TGTTCCTCGA TTTTGAACCG GGCATTCATT ATCCGCAGTT TCAAATGCAA GCAGGGGTCA CGGGTACCAA TACTATCCGC ATTTATAACC CGACCAAGCA AGCACAAGAG CATGACAGCG AAGGGCAGTT TATTCACAAA TGGGTGCCAG AGTTGGCGCA AGTGCCTGTA CCGCTGCTCT TTGAACCCTG GCTGATGACA CCGCTTGAAG CGCAGATGTA TCAAGTACCG CTTGAGAGCC CTTACCTCAA GCCGGTGATG GATTTGGAAG CCAGTGCCAA GCAAGCACGG GATCGCTTAT GGCAGTGGCA GAAACTGCCT GCGGTACAAG CCGAAGCGAT GCGTATCCTC GCGCGCCATG TGCGGCAAGC TAAACCGAGA ACTTCGCCGC GCCAACCCAA CAAGCGTCAA CCGGAGATGG ATTAA
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Protein sequence | MEKINLVWLK RDLRLTDHAP LQAALTSGRP TLLLYLFEPM LLGDAHYSER HWRFVWQSLQ AINRDLAQSK GEVLIVTSDW QTCFARIAER YAIEAIYSHQ EVGLACTFQR DLALAQWCQQ HDIVWHEFPY AAVIRGAQTR KNWDEHWQQV MRSPCCDPDL TRANWLKLDA ATLGLRSDIP ATWQSKQAGM QTGGSDMAWA TLEDFFVRRG REYYRSISSP SLARHACSRM SPYLAWGNIS LREMYQTLLK HWSVAGFRRS LIALSSRLHW HCHFIQKFES ECEMEFRCVN RAYDSLLQQS SDAPAAQLAA WQTGHTGIPL VDACMRCLIQ TGYLNFRMRA MLVSVLTHHM NVDWRAGVTY LAQLFLDFEP GIHYPQFQMQ AGVTGTNTIR IYNPTKQAQE HDSEGQFIHK WVPELAQVPV PLLFEPWLMT PLEAQMYQVP LESPYLKPVM DLEASAKQAR DRLWQWQKLP AVQAEAMRIL ARHVRQAKPR TSPRQPNKRQ PEMD
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