Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0941 |
Symbol | |
ID | 5136566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 966552 |
End bp | 967034 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532399 |
Product | hypothetical protein |
Protein accession | YP_001216887 |
Protein GI | 147673175 |
COG category | [S] Function unknown |
COG ID | [COG1433] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0583714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCTAG CCGTTCCTAG CCGCCACGGT GTGCCGTTTA ACCATTTTGC CAAAGCGCCC TCATTTTCCG TTATCGATTC CAATACACAG CAGTTACAAG CGGAATTCCA TCTTGAACTT GACCCATCAA AGTCCTGTGG CAAAAAGTCA GCGATTCTGC ATCAGCTCCG CCACTATCAA ATCGAAGGAG TTGCGGTTAG CCAAATCGGA CAATCCATGC TGCAAGCCTT GTTTAACGCA GGGATCCGCG TCTATGCTTT ACCTAGGGGA GTTGCTTTAA CCGATCTGGT ATTAACACAG TTACAGCCAA TCACGGATTT AAGTTATGGC AAAGCCTCAC CAAATAAAGT CCATGGTGAA CGAGGATGTG GTAAACACAG TAGCAATCCT TCAGGCTCGC GTAACACATT CGTTTCGCCA TCGACACACC TGTTTCAGCG TGGGTTTTCC ATCAAACGGT TATGGAAAGG AGAAGAGAGA TGA
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Protein sequence | MILAVPSRHG VPFNHFAKAP SFSVIDSNTQ QLQAEFHLEL DPSKSCGKKS AILHQLRHYQ IEGVAVSQIG QSMLQALFNA GIRVYALPRG VALTDLVLTQ LQPITDLSYG KASPNKVHGE RGCGKHSSNP SGSRNTFVSP STHLFQRGFS IKRLWKGEER
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