Gene VC0395_A0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0941 
Symbol 
ID5136566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp966552 
End bp967034 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content47% 
IMG OID640532399 
Producthypothetical protein 
Protein accessionYP_001216887 
Protein GI147673175 
COG category[S] Function unknown 
COG ID[COG1433] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0583714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTAG CCGTTCCTAG CCGCCACGGT GTGCCGTTTA ACCATTTTGC CAAAGCGCCC 
TCATTTTCCG TTATCGATTC CAATACACAG CAGTTACAAG CGGAATTCCA TCTTGAACTT
GACCCATCAA AGTCCTGTGG CAAAAAGTCA GCGATTCTGC ATCAGCTCCG CCACTATCAA
ATCGAAGGAG TTGCGGTTAG CCAAATCGGA CAATCCATGC TGCAAGCCTT GTTTAACGCA
GGGATCCGCG TCTATGCTTT ACCTAGGGGA GTTGCTTTAA CCGATCTGGT ATTAACACAG
TTACAGCCAA TCACGGATTT AAGTTATGGC AAAGCCTCAC CAAATAAAGT CCATGGTGAA
CGAGGATGTG GTAAACACAG TAGCAATCCT TCAGGCTCGC GTAACACATT CGTTTCGCCA
TCGACACACC TGTTTCAGCG TGGGTTTTCC ATCAAACGGT TATGGAAAGG AGAAGAGAGA
TGA
 
Protein sequence
MILAVPSRHG VPFNHFAKAP SFSVIDSNTQ QLQAEFHLEL DPSKSCGKKS AILHQLRHYQ 
IEGVAVSQIG QSMLQALFNA GIRVYALPRG VALTDLVLTQ LQPITDLSYG KASPNKVHGE
RGCGKHSSNP SGSRNTFVSP STHLFQRGFS IKRLWKGEER