| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0892 |
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| Symbol | |
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| ID | 5137429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 905994 |
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| End bp | 907199 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532350 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001216838 |
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| Protein GI | 147675043 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000149436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTACTTG GCTGCGTGGT CTCGCCGATT TCTTGTCTTA CGAATATCGA CCACATTGTT
GACGAGCCTG TTGCAGGGTG CGCAGGTATG GATAACCAAG GACGTCAAAC CATGAGTCTG
ATTCATCAAT CTGTATCACG AGTTATGAAG CGAAGCGTGC TGCTTATTGC AGCGGGTGTT
GCGCTGTTCA CAACTTCCGC TTTTGCAGAA GAGAAAGTTT ACCGTTTAAC ACTGGCTGAG
ACATGGGGAC CTAACTTCCC AATCTTCGGC GACACCACAA AGAATATGGC GGCAATGGCG
GAGAAAATGT CCAATGGCCG TTTACAAATT CGCATTGATT CTGCCAACAA ACATAAAGCG
CCACTGGGTG TGTTTGATAT GGTGAAATCG GGCCAATACG ACATGGGACA CTCCGCGTCT
TATTACTGGA AAGGCAAAGT TCCGAACACT TTGTATTTTA CCTCTATGCC TTTTGGTATG
ACGACCGGCG AGCAATACGC ATGGTTCTAC CACGGTGGTG GTATGGAACT GATGGAGAAG
GTTTACTCTC CACACAATAT GCTCTCATTC CCCGGTGGTA ACACCGACGT GCAGATGGGC
GGCTGGTTCC AAAAAGAGAT CAACAGCGTT GAAGATCTGC AAGGGCTGAA AATGCGCATT
CCCGGTTTTG CCGGAGAAGT GTTAGCGGAG CTCGGTGCCA AACCCACCAA CATTGCTCCG
GGAGAGCTAT ACACTTCGCT CGAGCGTCGC ACGATTGATG CGCTAGAGTG GGTAGGGCCG
TCACTTGATC TACGTATGGG TTTCCACAAG ATTGCGCCTT ATTACTACAC CGGTTGGCAT
GAGCCAGCAA CTGAGCTGCA ATTCTTAGTC AACCAAAAGA CGTGGGATAA ATTGCCTGAA
GATCTGCGTG AAATCTTACG TGTTGCGATG CGCACTGCGG CTTACGACAT GTATGTTCAA
TCAGTTCATG AAAGTGGCAA AAACTGGGTT TCGATTACCC AAGAGTTCCC AGATGTGAAA
GTGAAGACCT TCCCAGCGCC TGTGATTAAA GCCCTGCGTG AGGTTAACGA CCGACTACTG
GCGAAACACG CAGCAGAAGA TCCACTGGCT AAAGAGATTC AAGAATCGCA AGCCAACTAT
CTAAAACAAA CACGTAGTTG GACAGATATT TCACTGCGAG CCTACCTCAA TAGCGAATCA
CAATGA
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| Protein sequence | MLLGCVVSPI SCLTNIDHIV DEPVAGCAGM DNQGRQTMSL IHQSVSRVMK RSVLLIAAGV
ALFTTSAFAE EKVYRLTLAE TWGPNFPIFG DTTKNMAAMA EKMSNGRLQI RIDSANKHKA
PLGVFDMVKS GQYDMGHSAS YYWKGKVPNT LYFTSMPFGM TTGEQYAWFY HGGGMELMEK
VYSPHNMLSF PGGNTDVQMG GWFQKEINSV EDLQGLKMRI PGFAGEVLAE LGAKPTNIAP
GELYTSLERR TIDALEWVGP SLDLRMGFHK IAPYYYTGWH EPATELQFLV NQKTWDKLPE
DLREILRVAM RTAAYDMYVQ SVHESGKNWV SITQEFPDVK VKTFPAPVIK ALREVNDRLL
AKHAAEDPLA KEIQESQANY LKQTRSWTDI SLRAYLNSES Q
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