Gene VC0395_A0862 details

Gene Information

• Locus tag: VC0395_A0862
• ID: 5135393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 872370
• End bp: 872972
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640532320
• Product: putative alpha-ribazole-5`-phosphate phosphatase CobC
• Protein accession: YP_001216808
• Protein GI: 147674014
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0406] Fructose-2,6-bisphosphatase

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGAA TTTGGTTACT GCGTCACGGC AAAACACAAG GCCCTGCAGC CCTGAATGGT 
ATAACGGATG TCGCGGTGAA GCCGAGCGTG CAGCAAGCGA TAGCCAGCCA ATTGAGCACT 
TTGCCGTTTA CTCGTGTGAT AAGCTCCCCC TTACGTCGCT GCGCCGATCT GGCGCGATTG 
CTCCAATCAG CTCGTCCGCA CGTTATGCTC GATTTCGACC CGCAGCTCCA AGAGCTTAAC 
TTTGGTGAGT TGGATGGGCA AAGTTTTGCC GACTTGGAGA CTCAATGGCC AATATTGGAT 
GCCTTTTGGC AAGACCCCGC AAAGAACACA CTGCCACAAG CTGAACCTCT CGCTATGGCC 
TATCAAAGAG TGAGTCAAGC TTGGCAACAA TGGTTACCTA AGCTTGAGAG CGATACGCTT 
ATCCTCTGCC ATGCAGGAAC CATACGTTTG ATTTTGGCAC ACGTATTGGG TGTCGATTGG 
CGCAACCCAC ACTGGCATAC TCGGTTAACC ATTCCTCATC AATCGGTGAC AGAGCTTGTC 
CTTTATCCCG GTGAGCCACC GATAGTGAGC GTGACCAGCA TCGGAAATGC GCTTTGCCGT 
TAG 

 

Protein sequence

MIRIWLLRHG KTQGPAALNG ITDVAVKPSV QQAIASQLST LPFTRVISSP LRRCADLARL 
LQSARPHVML DFDPQLQELN FGELDGQSFA DLETQWPILD AFWQDPAKNT LPQAEPLAMA 
YQRVSQAWQQ WLPKLESDTL ILCHAGTIRL ILAHVLGVDW RNPHWHTRLT IPHQSVTELV 
LYPGEPPIVS VTSIGNALCR