Gene VC0395_A0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0857 
Symbol 
ID5137749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp868948 
End bp869394 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content49% 
IMG OID640532315 
ProductPilB-related protein 
Protein accessionYP_001216803 
Protein GI147675201 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAACT GGCAACAGGT GTTGGATTTT GCAAACCAAG GCAATCCTAA GCCAGAGCGT 
GAAGTGACGC GCAGTGATGA AGAGTGGCGC ACTTTGCTTG ATGAACAGCA GTATTACGTG 
ATGCGTCAAC ATGGCACAGA GAGAGCCTTT TCTAATGCGA TGTGTGAGCT GTTTGAGCCG 
GGTTTATACC AATGTGCCGG TTGCCAAACC CTGTTATTTG ATTCGGCAAC CAAATTTGAT 
TCAGGCACAG GCTGGCCTTC GTTTTCGCAG CCAGTCAAAT TCAATGCCAT TTCCTACCAT 
ATGGATCAAA GCTTAGCGCG TGCTCGAGTG GAAGTGCGTT GTAACACTTG CGAGTCGCAC 
CTAGGGCATG TGTTTCCTGA TGGGCCGCCG CCAAGCGGTT TGCGTTACTG CATCAATTCG 
GTTGCCGTGA ACAAACTCAG TGCATAA
 
Protein sequence
MLNWQQVLDF ANQGNPKPER EVTRSDEEWR TLLDEQQYYV MRQHGTERAF SNAMCELFEP 
GLYQCAGCQT LLFDSATKFD SGTGWPSFSQ PVKFNAISYH MDQSLARARV EVRCNTCESH 
LGHVFPDGPP PSGLRYCINS VAVNKLSA