| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0851 |
|---|
| Symbol | |
|---|
| ID | 5135097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 862497 |
|---|
| End bp | 863372 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640532309 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001216797 |
|---|
| Protein GI | 147674190 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.180241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAC AAATCATTGC CATTCTCTTT CCTGTGATGA GCTTAGTCTT GATTGGCTAT
TTGATTGCTC TCTGGCTCAA ACCCGATTTT CGCCCGATCA ATCGCATCAA TATGGAGGCC
TTTGTGCCTG CGTTGGTGTT TTCTTCACTG GTCAACATGC CACTGGATAC GCAGCAAACA
CCTCTGTTGC TTGCCGCTCT TGTCGCGGTA TTGCTGCCCG GCATGTTAAT GCTCCTGATA
TGTCGTTTGG GTCGCTGGTC ATTTAAAACA TGGGCTCCAC TGCACATGTT TCGCAACAGC
GGTAATTTAG CGATTCCCCT GTTTACTTAT GCGTTTGGCG AAACCGCGCT CCCCTCTGCC
GTGTTGCTGT TTGTGGTTTC TATGTGTCTG CACATTAGCT TAGGGGTAGC CATGCTGAGC
AAAGGCAGCG TATTGAAAAC CGTGCTCAGC GCTCCGGTCT TTTTAGCATC CTCACTGGCT
TTACTGCTCA ATCTAAGTGG AGTCTCTATC TGGTCCCCCT TGTACAACGC CACCGCTTTA
CTGGGACAAG CTGCCGTTCC TGTGATGCTG CTTTCGCTCG GCTCACAAAT GATCAACCTG
CGCTTAGCCG GGCTCAAAGT TGGCCTTGTT TCAACGGCAC AATCTCTGCT CACCGGAGCC
TGCGCGTTTG CGCTGATTTA CTTTTTCATT CCACTGCCTC CCTTACAACT GCAAATGATG
GTGCTGTTTA CCATGTTGCC CCCCGCAGTG ATGAATTATC TGTTCGCCGA GCGTTATCAC
ATCGAGCCTA CTCAGGTTGC GGCTATGGTG TTGTTTGGTA ATTTCTTCAG CTTATTAAGC
CTGCCCATAT TGCTGTTTAT CGCTCTTTCA CTCTGA
|
|---|
| Protein sequence | MFEQIIAILF PVMSLVLIGY LIALWLKPDF RPINRINMEA FVPALVFSSL VNMPLDTQQT
PLLLAALVAV LLPGMLMLLI CRLGRWSFKT WAPLHMFRNS GNLAIPLFTY AFGETALPSA
VLLFVVSMCL HISLGVAMLS KGSVLKTVLS APVFLASSLA LLLNLSGVSI WSPLYNATAL
LGQAAVPVML LSLGSQMINL RLAGLKVGLV STAQSLLTGA CAFALIYFFI PLPPLQLQMM
VLFTMLPPAV MNYLFAERYH IEPTQVAAMV LFGNFFSLLS LPILLFIALS L
|
|---|
| |