Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0840 |
Symbol | |
ID | 5135617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 854134 |
End bp | 854619 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640532299 |
Product | hypothetical protein |
Protein accession | YP_001216787 |
Protein GI | 147675571 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000581009 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTAG AAATCGTACC GATTCGACCT GAGTTTGACG CTGAGATTTG CCAAATTATT CAAAGCGTCG GCGCTGAATT TGGCGCGATT GGTGAAGGGT TTGGCCCATC GGATGCCGAA GTGCTTGCCA TGAGCCAGTA CTATCGAGAG CAAGACCGTA GCGCGTATTT TGTTGCGTTA TTGGAGGGGA AGGTAGTCGG CGGTGGTGGC ATTGCACCTT TTGCTGGCCA TACGGATTTG TGTGAGCTGA AGAAGTTGTT TCTGCTCCCC ACAAGCCGCG GCCATGGCGT AGGCCGGGCG CTCAGCGAAC ATTGTTTGAA TTTTGCGAAA CAGCAAGGCT ATACCAAATG TTATTTAGAT ACCCTTTCTA GCATGACTCA AGCGATCAAG CTCTACCAAC AGCTTGGTTT TGAGCACTTA ACGCAGCCCA TGGCGGGGAC AGAGCATAAT GGCTGCGACG TGTGGATGCT GAAATCACTC AACTAG
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Protein sequence | MRVEIVPIRP EFDAEICQII QSVGAEFGAI GEGFGPSDAE VLAMSQYYRE QDRSAYFVAL LEGKVVGGGG IAPFAGHTDL CELKKLFLLP TSRGHGVGRA LSEHCLNFAK QQGYTKCYLD TLSSMTQAIK LYQQLGFEHL TQPMAGTEHN GCDVWMLKSL N
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