| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0794 |
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| Symbol | trpD |
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| ID | 5135283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 804170 |
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| End bp | 805168 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640532252 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001216744 |
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| Protein GI | 147674592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCA TTATTAATAA ACTCTATGAA CAGCAAGGGC TCACGCAAGC CGAGAGCCAA
CAGCTTTTCG ACCAAATTAT TCGCGGTGAA ATGGATCCTG TATTGATGGC GGCGGTACTG
ACTGCACTGA AAATCAAAGG CGAAACGCCA GATGAAATCG CGGGTGCGGC TAAAGCCCTG
CTCGCCAACG CCAATCCATT TCCGCGTCCT GATTACGACT TTGCCGATAT CGTCGGTACC
GGTGGCGATG GCTCAAACAC CATCAACATC TCAACCACCG CCGCATTTGT CGCCGCAGCG
TGTGGCGTGA AAGTCGCCAA ACACGGCAAC CGTGGGGTAT CGAGCAAATC CGGCTCTTCC
GATCTGCTCA GCTCATTTGG GATCAACCTT GCCATGAGCG CGCAAGATTC GCGCCAAGCC
TTGGATGATC TCGGTGTCGC TTTCTTGTTT GCCCCTCAGT ATCACGGCGG TGTGCGCCAT
GCGATGCCGG TGCGTCAAAC CATGAAAACT CGCACCATTT TCAACATCTT AGGCCCCCTG
ATTAACCCTG CTCGTCCCAA TATTGAATTG ATGGGGGTTT ACAGCAAGGA TTTGGTTCGT
CCTATTGCGC AAACCATGTT ACAAATGGGT CTGAAACGCG CAGCGGTGGT GCATGGTTCA
GGTCTTGATG AAGTCGCGAT TCATGGCGAA ACGCAAGTAG CAGAAATTCG CCAAGGCGAA
TTGATTGAAT ACACGCTCAC TCCGGAAGAT TTTGGTGTTA GCCGTTACCC ACTGGATGCG
ATCCGTGGTG GAGAGCCAGA AGAGAATCGC GCCATCATCA CCCAGATCCT AACGGGCAAT
GGCACAGCAG CACAAATGGC GGCAGTGGCA GTCAACGTTG CACTTCTGCT GCGTCTATTT
GGTCAAGAAG ATCTGAAAGC CAACACCCAA CAAGCGATCG CCGTGATGAA ATCGGGCCAA
GCCTATGGAT TGGTTCAGCA GTTAGCACAA CGAGGTTAA
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| Protein sequence | MQTIINKLYE QQGLTQAESQ QLFDQIIRGE MDPVLMAAVL TALKIKGETP DEIAGAAKAL
LANANPFPRP DYDFADIVGT GGDGSNTINI STTAAFVAAA CGVKVAKHGN RGVSSKSGSS
DLLSSFGINL AMSAQDSRQA LDDLGVAFLF APQYHGGVRH AMPVRQTMKT RTIFNILGPL
INPARPNIEL MGVYSKDLVR PIAQTMLQMG LKRAAVVHGS GLDEVAIHGE TQVAEIRQGE
LIEYTLTPED FGVSRYPLDA IRGGEPEENR AIITQILTGN GTAAQMAAVA VNVALLLRLF
GQEDLKANTQ QAIAVMKSGQ AYGLVQQLAQ RG
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