Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0741 |
Symbol | |
ID | 5136911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 768425 |
End bp | 769492 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640532199 |
Product | hypothetical protein |
Protein accession | YP_001216691 |
Protein GI | 147674642 |
COG category | [S] Function unknown |
COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCTATA GCACTCCAAC GCTACGACAA CTGATTGAGA CGGGTTTAAT CGACATTGAA ACCTCGTTAG ATCAGGTGCT GCCAAAATTC GGCGTTGAGC AAGCGCTCAA CGTGGCCGTC AGTGGCGCGA TTCGTGACCT CTATGATTAC AATAGCTGGA TTGTTCGCCA AATTATTCCA ACGTCAGAGA GCGACGACCA AACCATTATT GATACTGCTC GCACCGAGGG TGTGATCCGC AAACTGGCCT CTGCTTCGGC AGGGCCTGTC ACTTTCACAG GCAATGCACC CATTCCGGTT TCCACTGTGA TGACGCATCA AGATGGGCGC TCATATCGAG TGACCTCATC GGCTGCGCCA TCCGGTGGCT CTGTGGTGGT GCAAATCCAA GCCGAAGAGA CGGGCGCGAG TTACGACTTA CCAGCAGGCC AACAACTTAC CCTTGCGCAA ACTGTCCCAG GTGTTCAGCC TGTCGGCCTT ACAGGTGATA TTTCAGGCGG TGCCGATATT GAGCCTGTCT CTCAAGTGCT AGAGCGCTTG CTGTTTCGCA AGCGTAATCC GCCAATGGGT GGCGCTCCGC ATGACTATGT GGCGTGGTGC CGCGAAGTCG CAGGCGTTAC GCGCGCGTGG GCGGTAGATT TTTACCAAGG CCCATCAACG GTTGGTTATG CGTTCGTGTT TGATAATCGC GCTAGCATTT TGCCTACCGT GACCGATAAG CAAGCCATGC AGCAATACAT CTATCGTCAC TCCGATCCTG CAACCGGAAC GGATGTTGGT CGTCCGGCTG GCATTGAAGC GATTGATATT CCTCTTACGC TCAAAGTCAC CAATCTAAGC ATTCAGTTGA CACCAGATAC CGAAGAGAAC CGCACCGCTG TACAAACTAA CCTCGATGCT TACTGGCGAA CTTTATCGCC TGGTTCAACC TTGGTGCTCA GCAAAGTGCG CACGGCCATT GGTGAAGTCG ATTCAGTGAG TGACTATATT CTCGATTTGT CTGCCGACGT GCCATCGGCC GCCGAAGAGC TGCACGCGCT AGGAGTGATC ACATGGGCCA CTCTGTAG
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Protein sequence | MPYSTPTLRQ LIETGLIDIE TSLDQVLPKF GVEQALNVAV SGAIRDLYDY NSWIVRQIIP TSESDDQTII DTARTEGVIR KLASASAGPV TFTGNAPIPV STVMTHQDGR SYRVTSSAAP SGGSVVVQIQ AEETGASYDL PAGQQLTLAQ TVPGVQPVGL TGDISGGADI EPVSQVLERL LFRKRNPPMG GAPHDYVAWC REVAGVTRAW AVDFYQGPST VGYAFVFDNR ASILPTVTDK QAMQQYIYRH SDPATGTDVG RPAGIEAIDI PLTLKVTNLS IQLTPDTEEN RTAVQTNLDA YWRTLSPGST LVLSKVRTAI GEVDSVSDYI LDLSADVPSA AEELHALGVI TWATL
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