Gene VC0395_A0625 details

Gene Information

• Locus tag: VC0395_A0625
• ID: 5135361
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 667068
• End bp: 667697
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640532083
• Product: SecA, C-motif-containing protein
• Protein accession: YP_001216575
• Protein GI: 147674463
• COG category: [R] General function prediction only
• COG ID: [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0113543
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTTCTA TGAATTATTC CCTGATCGAT CTCAGCGCGA TTGAATGCCC TGAGTCGGAT 
CTGTTTATTG AAGGTGTGGT GCTCGCCGCT AATTTTGCGA CTCGTCCGCT CGATCCTGAG 
CAGTGGCTAC CCGAGCTGTT TGTCGAGCAA CATCAGGCGC TATTACAACC GGTGACCGAG 
CAAATTCATC TCCAATACCA GCAACTTAAA GGCAATGGGT ACGATTTGTT GACGCTGTTG 
AATGAGCATG CACCCTCGCG TGAGCAAGGT TTGGCAGATT TTTCGGAAGG CTTTATGCAA 
TTATGGCCGC AAGTTGAACC CATGTGGCAG CAAGGCGCAT TTGCAGATGG TTCGATCCGC 
ATGCTGCAAG CATTATTGAC CACCTTGATG TTGGCGATTG ATGAAGCGCA AACCCAAGCG 
CAAATGCGCG AAGCGGGCTA TGAACAAGTT CCTGCGCTCG CCGATTTGAT CGAGCAACTG 
AATTTAATGG TGCACGAAGT CGCGCTTGCG GCGGATGAAG CCATGCTCGG CGCTAAAGCA 
CAAAGTGTGA ATCCGTTTAA AGGCATTGGC CGCAATGATG CTTGCCCTTG CGACAGCGGT 
AAAAAATTCA AACAGTGTTG TGGGCAATAG 

 

Protein sequence

MFSMNYSLID LSAIECPESD LFIEGVVLAA NFATRPLDPE QWLPELFVEQ HQALLQPVTE 
QIHLQYQQLK GNGYDLLTLL NEHAPSREQG LADFSEGFMQ LWPQVEPMWQ QGAFADGSIR 
MLQALLTTLM LAIDEAQTQA QMREAGYEQV PALADLIEQL NLMVHEVALA ADEAMLGAKA 
QSVNPFKGIG RNDACPCDSG KKFKQCCGQ