| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0567 |
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| Symbol | |
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| ID | 5136998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 609805 |
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| End bp | 610704 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640532025 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001216517 |
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| Protein GI | 147674833 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0502789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAACATA ATGTGTCAGA AACGATGAAA CTAGATGACC TAAACCTCTT TCGACTGGTT
GTCGAAAATG GAAGCTATAC CTCAACTTCA AAAAAAACCA TGATCCCTGT GGCAACGATC
ACAAGACGGA TCCAAGCCTT GGAGGATTCC CTAAACCTTA GGTTGCTCAA TCGTCACGCT
CGTAAACTGA CTCTGACCGA AGCGGGCGAA CGTTTCTACA AAGATTGCTC TCCCCTGCTG
GAGCGTCTCG CTTCAATGAC AGAAGAGATC ACCGATGAAT GTCGTGGTGC GTCGGGACGC
ATTCGTATTT CTGCACCATC CAATCTGACA AAACGAATGA TGATGCCGAT GTTCAATGCC
TTTATGGAAA AATACCCCGA TATTCATATT GAGCTGATGA TGAGTAACCA AGCCGACGAT
CTCGACCCCA CTGAATGGGA TGTGATTTTC CGAGTTGGCC CACAGCGTGA TTCCAGCTTG
ATAGCTCGTA AAATCGGTGA AGTAAAAGAC ATTTTGGTTG CCAGCCCTCA ATACTTGTCG
AGCCATCCGC AACCGACTCA TGCTGAAGAG TTGCATCAAC ATCAGTTACT CAAAGGTTAT
CCATTGCTCA AATGGCAACT GACCAACAGC CAAGGTGAAA CTGTCGTCAA CAGTGATCGC
GGCCGTTTTC AAGCCAGCGC ACTGAATGTT GTTCGCAGCG CATGTTCAGA AGGTTTAGGC
ATTACGCTCA TGCCCGATGT GATGCTGCGT GAATTTCTTG AGGATGGCAG TTTGGTACAA
GTGCTGTCGG ATTGGAGCTC AAATCCGCGG GATATCTACA TGCTGTATAA CCACAAAGAT
CACCAGCCAG AAAAAGTGCG TCTGTTTATT GATTTTGTGA TTGGCTACCA CCTGCAATAA
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| Protein sequence | MQHNVSETMK LDDLNLFRLV VENGSYTSTS KKTMIPVATI TRRIQALEDS LNLRLLNRHA
RKLTLTEAGE RFYKDCSPLL ERLASMTEEI TDECRGASGR IRISAPSNLT KRMMMPMFNA
FMEKYPDIHI ELMMSNQADD LDPTEWDVIF RVGPQRDSSL IARKIGEVKD ILVASPQYLS
SHPQPTHAEE LHQHQLLKGY PLLKWQLTNS QGETVVNSDR GRFQASALNV VRSACSEGLG
ITLMPDVMLR EFLEDGSLVQ VLSDWSSNPR DIYMLYNHKD HQPEKVRLFI DFVIGYHLQ
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