| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0511 |
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| Symbol | rfaH |
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| ID | 5135133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 545039 |
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| End bp | 545536 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640531969 |
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| Product | transcriptional activator RfaH |
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| Protein accession | YP_001216462 |
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| Protein GI | 147675715 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGTT GGTATCTACT TTACTGCAAA CGAGGCGAGC AGCAGCGCGC GAAGATGCAC
TTAGAAAATC AAAGTGTTGA ATGCTTCTAC CCCGAAGTGT GCGTTGAAAA AATTCTACGT
GGTAAGCGGC AAATGGTTCA GGAGCCGTTA TTCCCTTCTT ATATGTTTGT GCGTTTCGAT
TTCGAAAATG GACCTTCATT TACGACCGTA CGTTCTACGC GTGGTGTCGT AGATTTTGTC
CGCTTGGGGC CTCATCCACG TGAACTGCAA GGCGATTTGA TTTATCAATT GAAACAGCTT
GATTGTGAGC AATTGAAGCA TGCCACCAAA CAATTGCCAG AAAAAGGGCA AACCGTGCGA
GTCGCAAGAG GTCAGTTTGC GGGCATTGAA GCGATTTATT TAGAGCCGGA TGGTGATACT
CGCTCGATCA TGCTGGTGAA GATGATCAGT CAGCAAGTAC CAATGAGTAT TGAAAATACC
GATTGGGAAG TCACCTAA
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| Protein sequence | MKRWYLLYCK RGEQQRAKMH LENQSVECFY PEVCVEKILR GKRQMVQEPL FPSYMFVRFD
FENGPSFTTV RSTRGVVDFV RLGPHPRELQ GDLIYQLKQL DCEQLKHATK QLPEKGQTVR
VARGQFAGIE AIYLEPDGDT RSIMLVKMIS QQVPMSIENT DWEVT
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