| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0505 |
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| Symbol | toxR |
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| ID | 5136021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 537865 |
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| End bp | 538749 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640531963 |
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| Product | cholera toxin transcriptional activator |
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| Protein accession | YP_001216456 |
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| Protein GI | 147674563 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGAT TAGGACACAA CTCAAAAGAG ATATCGATGA GTCATATTGG TACTAAATTC
ATTCTTGCTG AAAAATTTAC CTTCGATCCC CTAAGCAATA CTCTGATTGA CAAAGAAGAT
AGTGAAGAGA TCATTCGATT AGGCAGCAAC GAAAGCCGAA TTCTTTGGCT GCTGGCCCAA
CGTCCAAACG AGGTGATTTC TCGCAATGAT TTGCATGACT TTGTTTGGCG AGAGCAAGGT
TTTGAAGTCG ATGATTCCAG CTTAACCCAA GCCATTTCGA CTCTGCGCAA AATGCTCAAA
GATTCGACAA AGTCCCCACA ATACGTCAAA ACGGTTCCGA AGCGCGGTTA CCAATTGATC
GCCCGAGTGG AAACGGTTGA AGAAGAGATG GCTCGCGAAA ACGAAGCTGC TCATGACATC
TCTCAGCCAG AATCTGTCAA TGAATACGCA GAATCAAGCA GTGTGCCTTC ATCAGCCACT
GTAGTGAACA CACCGCAGCC AGCCAATGTC GTGGCGAATA AATCGGCTCC AAACTTGGGG
AATCGACTGT TTATTCTGAT AGCGGTCTTA CTTCCCCTCG CAGTATTACT GCTCACTAAC
CCAAGCCAAT CCAGCTTTAA ACCCCTAACG GTTGTCGATG GCGTAGCCGT CAATATGCCG
AATAACCACC CTGATCTTTC AAATTGGCTA CCGTCAATCG AACTGTGCGT TAAAAAATAC
AATGAAAAAC ATACTGGTGG ACTCAAGCCG ATAGAAGTGA TTGCCACTGG TGGACAAAAT
AACCAGTTAA CGCTGAATTA CATTCACAGC CCTGAAGTTT CAGGGGAAAA CATAACCTTA
CGCATCGTTG CTAACCCTAA CGATGCCATC AAAGTGTGTG AGTAG
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| Protein sequence | MFGLGHNSKE ISMSHIGTKF ILAEKFTFDP LSNTLIDKED SEEIIRLGSN ESRILWLLAQ
RPNEVISRND LHDFVWREQG FEVDDSSLTQ AISTLRKMLK DSTKSPQYVK TVPKRGYQLI
ARVETVEEEM ARENEAAHDI SQPESVNEYA ESSSVPSSAT VVNTPQPANV VANKSAPNLG
NRLFILIAVL LPLAVLLLTN PSQSSFKPLT VVDGVAVNMP NNHPDLSNWL PSIELCVKKY
NEKHTGGLKP IEVIATGGQN NQLTLNYIHS PEVSGENITL RIVANPNDAI KVCE
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