| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0461 |
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| Symbol | |
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| ID | 5137575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 493201 |
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| End bp | 495414 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531919 |
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| Product | putative exopolysaccharide biosynthesis protein |
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| Protein accession | YP_001216412 |
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| Protein GI | 147674262 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGCA AACAATTCAC TCAAGAAGAA GTGATCGATA TTCGTCAGTA TTTTAATGTG
CTACTTAACT ATAAGTGGCG CATCTTACTT TTCTCCGTGA TGGTGACGGC GATCACCTTA
CTGTTCGTAC TCTCAATGCG CTCAGAATAC ACAGCGCGTG CGACTATTTT GATTGAATCG
ACGCAAGCGA AAGCGGTATC CATTGAAGAA GTGTATGGGC TCGATACCAA AAGTCAGGAG
TATTACCTGA CCCAAATTGA GATCCTCAAA TCCGACACGA TCGCTCAAGA AGTCATTGAA
CGACTTGATT TAGCCTCCGA TCCAGAATTC GACTTAAGCC CAGAGAGCGA CGCTTCTCCA
AGCTTAAAAG AACGCTTGGT AGAGTGGATG CCATTCCTAC AGGGATTTAA GCAGGAAGAG
ACCGTCGCCG ATCCTGATTT GGAAGCGTAT CGCCAAAATC GACTGATCTT GTATAAGTTC
AAACGCGGAA TGGAGATTAG CCCGATCCGC AAAACCCAGT TGGTGAATAT CTACTACACC
GCAGGTGATC CTAAGTTGGC GGCGAAAATC GCGAATGAGA TTGCGCGGGT GTATATGGAC
AGCCATTTGG AAGCCAAGTT AGAGGTAGAG CTAAAGGCGA ATACTTGGCT AAATACCCGT
ATGGAAGAGC TACGTACTCA ATTACGAGAA TCGGAAGCTA AGTTACAAGC GTTTTTGCAA
GCGGAAGGCT TGGTTGATGT GCAAGGTGTT GAAGGGCTAG CAACGCAAGA GTTGGAAGAG
CTGACTTCGC AGATGAACAA AGCGCGTGAT CGCCGCGTGG CCGCGGAAAC CCTGTATCAA
GTGGCGAACA GCTACAGTAA AAATGACAGT GACTTGACGG CTTTGTCGTC GATTCCTGAA
ATTTCCAATC ACCCAACCAT CCGTGATTTG AAAGTCGCTG AAGTGGATGC TGAGCGGAAA
GTCTCTGAGT TTTCTAAGCG TTACGGCCCT AAACACCCGA AATTGAAATC GGCATCAGCA
CAGTTAGAAG CGGTGCGTAA AAATCTGCGT GCAGAGCTGA GACAGCTGTT AAATGGTATC
AATAACGAGC TGCAAGCGGC CAAACAGTCT GAGCGGTCAT TACAAACGGA ATTTAATCAG
CGTAAATCTG AGTTCCAGAC CCTGACGGTA AAAAATGCTA AGTATTCTGA GCTGAAGCGC
GAAGTACAAA CTAACCGTGA ATTGTTTGAC CTGTTTTTAG CGCGTCAAAA AGAGACCAGT
GCTTCGGGGG ATTTTAATAC CACGATCGCT CGCTTTACTG ACCAAGCCAG TGCACCATTA
ACGCCGAGTA AACCCAATAA AAAATTGATT GTATTGCTTG CCTTTGTGGT GTCGTTTGGT
TTTGCTTGTG TAGTGGCGTT TATCGCTGAT GCGATGACTG ATACCTTTGC CGACATCAAA
CAGGTCGAGA AACAGCTGGC ACTGAGTTTA TTGGGCGTTG TTCCTGTGGT GCGTAAACAG
CGTGGCAAAC TGGATGCGAA AGCCTATTTT GATGAGAAAC TGCGTGAGCT AACCGAAGCG
GTGCGTACGA TACGGACCAG CTATTTGCTT GCGCATGTCA ATCAAGATCA GCATGTCGTG
ATGCTCACAT CTTGTCTGCC CGGAGAGGGA AAGACGACAT CTAGCCTGAA CTTGGCCTTG
TCGTTGGCGC AAATGGAAAA AACCTTGCTG ATTGACTGTG ATTTACGCAA ACCGGCGATT
GCGCACCGTT TTGGCATTTC TGGCTCACAA CCGGGCGTCA CCAATTTACT CAATGGCACG
CAAAGCTTAG AAGATTGCGT CTACCATGAT GAGCAATCCG GGCTCGATAT TCTCACTGCG
GGTGTTTATG CCTCCAACCC GTTAGAGCTG CTCTCTTCAA GCAAATTTAG TGAACTGTTG
GCCGATTTAC GTACTCGCTA TCAACGCATT GTGATTGATA CACCACCCTG TCTCGCAGTG
AGCGATAGCT TTATGTTGGC GCAATACGTG GACTCGGTGA TTTTGGTGAT TGATGCCAAC
CATACTCGAA CGCCAGTCGT GCGGGAAGTG GTGGGTAAAT TGACTCAGCA GGGCAGTCGT
ATTGATGGTG TGATACTCAA TCGTCTTAAT GCGAAAAAGG CTTCACGCTA CAGCGGCTAT
TATCACTACC AAGCTTACTA TGGCGAAGAG ACGAAATCGG GCGCGGCAAA GTGA
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| Protein sequence | MTGKQFTQEE VIDIRQYFNV LLNYKWRILL FSVMVTAITL LFVLSMRSEY TARATILIES
TQAKAVSIEE VYGLDTKSQE YYLTQIEILK SDTIAQEVIE RLDLASDPEF DLSPESDASP
SLKERLVEWM PFLQGFKQEE TVADPDLEAY RQNRLILYKF KRGMEISPIR KTQLVNIYYT
AGDPKLAAKI ANEIARVYMD SHLEAKLEVE LKANTWLNTR MEELRTQLRE SEAKLQAFLQ
AEGLVDVQGV EGLATQELEE LTSQMNKARD RRVAAETLYQ VANSYSKNDS DLTALSSIPE
ISNHPTIRDL KVAEVDAERK VSEFSKRYGP KHPKLKSASA QLEAVRKNLR AELRQLLNGI
NNELQAAKQS ERSLQTEFNQ RKSEFQTLTV KNAKYSELKR EVQTNRELFD LFLARQKETS
ASGDFNTTIA RFTDQASAPL TPSKPNKKLI VLLAFVVSFG FACVVAFIAD AMTDTFADIK
QVEKQLALSL LGVVPVVRKQ RGKLDAKAYF DEKLRELTEA VRTIRTSYLL AHVNQDQHVV
MLTSCLPGEG KTTSSLNLAL SLAQMEKTLL IDCDLRKPAI AHRFGISGSQ PGVTNLLNGT
QSLEDCVYHD EQSGLDILTA GVYASNPLEL LSSSKFSELL ADLRTRYQRI VIDTPPCLAV
SDSFMLAQYV DSVILVIDAN HTRTPVVREV VGKLTQQGSR IDGVILNRLN AKKASRYSGY
YHYQAYYGEE TKSGAAK
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