| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0444 |
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| Symbol | |
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| ID | 5135689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 473126 |
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| End bp | 474274 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640531902 |
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| Product | putative exopolysaccharide biosynthesis protein EpsF |
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| Protein accession | YP_001216395 |
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| Protein GI | 147673642 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA TATTGCTTAT CATGCCACTC TCTACGCTCA ATTGGGGGGA GAAAAATCTT
GGTGGTGTGG ATTCAGTATG CCAAATGTTG GTACGTCAAC TCGCTCAGCA AGAGCGTCCA
TACCATTACC GAGTGTTAGC GTTTGATCCG CTCAACAATC ACTCTTATTC AGGCGAGATT
ATCCAGTTGT CAAAACATCT GGAAGTGGTG ATTTGTCCGT TGCGGGAAAA GCGATTTGGG
CTGCCTTTGC CTAGCTTATT ATCCAATTGG CTCCGCATCC AAGAGCAACT GAAAGACTAT
CAGCCAGATT TGGTTCACTC TCATCTCAAC AGTTGGATGA TGGGACTTGG GCAGAAAACT
CGTAATGTGT TGACCTTGCA TTCTTATCGC AAGATTGGGC GTAAGCCAGT TTCAAAACTC
AATGATTTTG TTTATGAACA AATCATTCCA TGGGTAAGTC ATTTTTCCGT CGATTTTTAT
ACTTGTGTTG GCGAAGAGTT GCGTCAAGCG TTATCTCTGG AGACGAATAA GTCAATTCAA
GTGATTGGCA ATCCAGTCGA TCCTGACTAT TTCTCTGCCA ACTCTGCGAA CCAGAATCTG
CCCCAGAATG AAGTCAATTT AGTCACTTGT GCATTGATTA CTCGACGCAA GCGTATTGAT
CGAGCCATTG TATTACTGCG TGAGCTAAAA CAGCGAGGGC AAGCGGCTAC TTTACGTATT
ATCGGACTCA ATATGGATTC TGCTTATTAC GCGCAATTGC AGCAATTGAT CAAAGAGTAT
GAGCTTGAAC AAGATGTCAT TTTTCTTGGC AAACTTAATC AGCGTGAAAT TGTACAACAG
TACCAACAAG CGAATATTGG AATATTTACG TCACAACAAG AAACGTTCGG CTTAGCGCCA
TTGGAAATGA TGGCGGCGGG CTTGCCATTA ATTAGTACTC CTGTCGGGAT TTTAGGTGAA
CGGCAAGCAA CGTTTGACCA GTTAGGGGTG GTTTTTATGC AAGAAGGGCA GGAAGCGATG
ATTGCTGAGC GAATCAGTCA GATAAAAATA ACGGATACTC AAGCGATTCA AACCTATTTG
CGCGATCAAT TCGCAGTAGA AAATGTGATT GAACATTACC AGAATCTATA TCGAGAGGTA
CTGAGTTGA
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| Protein sequence | MSKILLIMPL STLNWGEKNL GGVDSVCQML VRQLAQQERP YHYRVLAFDP LNNHSYSGEI
IQLSKHLEVV ICPLREKRFG LPLPSLLSNW LRIQEQLKDY QPDLVHSHLN SWMMGLGQKT
RNVLTLHSYR KIGRKPVSKL NDFVYEQIIP WVSHFSVDFY TCVGEELRQA LSLETNKSIQ
VIGNPVDPDY FSANSANQNL PQNEVNLVTC ALITRRKRID RAIVLLRELK QRGQAATLRI
IGLNMDSAYY AQLQQLIKEY ELEQDVIFLG KLNQREIVQQ YQQANIGIFT SQQETFGLAP
LEMMAAGLPL ISTPVGILGE RQATFDQLGV VFMQEGQEAM IAERISQIKI TDTQAIQTYL
RDQFAVENVI EHYQNLYREV LS
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