| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0420 |
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| Symbol | xni |
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| ID | 5136319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 447114 |
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| End bp | 447965 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531878 |
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| Product | exonuclease IX |
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| Protein accession | YP_001216375 |
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| Protein GI | 147674734 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000094948 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTAGTA ATCTTGACGG ATTTGATTAC AATAAGGGCC TCACAAGCCC TTATTTTTTA
TGGTTTTTGG TTATGTTTCT TCATCTTGTC ATTATTGATG CGCTTAATTT GATCCGCCGC
GTTCACTCCG CGCAGACCGA TCCCAACGAC ATCACCAGAA CCGCGGAAAC CACAACACGC
ACTCTGCAGC GCATCATTAA TGAAGCGCTG CCCAGCCATA TGATTGCGGT GTTTGATCAT
CATTTATCTG ATCGTGGCTG GCGCGCTGAG TTACTCCCAA CTTACAAAGC CAATCGCAAA
CCCATGCCAG ACGTTTTGCA GCAAGGGCTA GATTCCATTC AAGATGCGTG GTGGCAACTG
GGGATTGATT CGCTGTTATC GGAAGGCGAT GAAGCGGACG ATCTGGTTGC AACACTGGCT
TGTAAAGTGG CGGCTCATCA AGAAAAAGTG ACAATTATCT CGACCGATAA GGGCTACTGT
CAGTTACTTT CTCCGACCTT ACAAATCCGC GACTACTTTC AACAACGTTG GTTAGATGAG
CCTTTTATCG CTCAGGAGTT TGGCGTTACT CCCGCACAAT TAACCGACTA TTGGGGATTA
ACGGGCGTCA GCTCAAGCCA AATTCCCGGC GTGGCCGGTA TTGGCCCGAA AGCGGCGAAA
GAGATTTTAA ACCAGTTCTC GAGCATTGAA GAGGCGTATG CCAGCCCTGA ACTACCGGCA
AAGTATCGAA AAAAACTCGA TCCTCACATT GAAATGGCGC GTATCTGTAA ACAAGTCAGT
GCCTTGAAAA CGGACATCGA GCTTGGGTTT AACTTGCAAG ATATCCGTTT TAACTCATCG
TCCGCGGACT AA
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| Protein sequence | MGSNLDGFDY NKGLTSPYFL WFLVMFLHLV IIDALNLIRR VHSAQTDPND ITRTAETTTR
TLQRIINEAL PSHMIAVFDH HLSDRGWRAE LLPTYKANRK PMPDVLQQGL DSIQDAWWQL
GIDSLLSEGD EADDLVATLA CKVAAHQEKV TIISTDKGYC QLLSPTLQIR DYFQQRWLDE
PFIAQEFGVT PAQLTDYWGL TGVSSSQIPG VAGIGPKAAK EILNQFSSIE EAYASPELPA
KYRKKLDPHI EMARICKQVS ALKTDIELGF NLQDIRFNSS SAD
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