| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0370 |
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| Symbol | |
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| ID | 5136170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 397351 |
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| End bp | 401682 |
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| Gene Length | 4332 bp |
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| Protein Length | 1443 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640531828 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001216326 |
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| Protein GI | 147673383 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCTCA TATTTCAAAT ATCACAAAAA GATAATGTCT TTTGTACGAT CAACGGGCGT
TCAATCGCAA CATTTACCGC TCCCTTTGAC GCTAATAAAA ATGGCCGTAA CACTGATTCT
GAAGTTTTAT CTTTAATCTC TGCGGATGAG TACCGGGACT CGCCAGTTCG ACAGGAAAAT
CTCCAAATTT TAATGAAAAA TATGGCGACA ATACATGGAG ATAAAATATC TCTAGTTTTC
CGAAGTACTC TTGATGCCTT GACATTCGAA AATTATTTAC GGCACAATTT AGATCTTCCC
AAAGACCAAT TTTTAGAAGC AATTACAGAA AAAATCGCCA ATGATAATCA GGTCGATAAG
CAACCTTCAA CTCATGTGCC TAATATCTCT CCATCATTCA CGCCTGGGAC TTCATCTAAT
TTGAATAGTC CATTCGTTTC TGCTAATGCT GAAGAGTCTT TGAGCTATAT ACCGACAGAT
GTTATTCCTT CGCTTGGTCG CTTACTTGAT AGTCAAGGTC GAGTTATTAA TGGTGTTTCA
TACTTCAGTA ATAATACTCG TGGTATTACT GGTGTAGATA AAACAGGGGC TATTTTAAAT
GATGGTTCAT TTGAATTTTC GTGGGGAGAT ATTATTAGCT TTTCAATCGA TACATTTGAA
TTAGGTAGTA CTCGAGCTAA TAAAACTGAT TTTTATATCA GTGAATTAGG TAAGGACAAT
GAGGGTAAGA ATGCTGAAGC TTTGATTCAT CGTTATGCAA GTATTGATGA TTCTAAGCTT
ATCATTCCAG ATAAAGTTAC GCAGATTTTT TCCCTATACC CTAATGTCAT TAATGAAGTG
ATTTCATTAT CATTACCTAA TGGCGATATC GAACTTGATA TTGGAGATGG TAAAACTCAG
ATTGTACCTG GTGAATTCTT TAAGCAGTTT GATTCTGGAT TAGCAGCACT TATCGATCAA
TCTATTTCAC CTATATCGAG GTTCAAATTT GAAGACAGTT TGCCTAAGAA AAAGTCAGCA
ATTGATTCTG AATCTTCACA AATCCAAGAT ATTATTAATA AACTCTGGGG TGCAACCGAT
ACCGTACAAG CTAATGGATG GAAAAAAGTC GATCGTTTTC ATATTTTTCA TGACAGTACA
AACTTCTACG GTAGTACAGG AAGTGCCCGA GCACAAGCAG CGGTGAATAT TGCTAATAGT
GCATTTCCAG TCTTAATGGC TCGTAATGAC AATAATTACT GGATTGATTT TGGTAAACCT
AAAGCATGGG ATTCGAATAG TCTGGCATTT ATTACTGAAG CACCTTCTAC AGTTGTGCCT
GATAAAGTAT CTGAAGATAC ATCAACCTTT AATTTACCTT TTATTAGTTT GGGCGAAATT
GGTAAAGGCA AGCTGATGGT ACTAGGAAAT GCGCGATATA ACAGTGTCTT AGTCTGTCCT
AATGGATTTA GTTGGGGCGG AACTGTTAAA AATGGTACTT GTAGCTTAAG TAGTGATCGT
GATGATATGG CTAATTTTTT TAGTAATGTC ATCCGCTATC TTACGGGAAG TACTTCCAAT
GATGTTATTG TTGGAACTAA TATTCCAGAA GTTTACTTTA AATCATCTGG CCAAACTATG
GGGTCAAAAG CCAATTTTGA ACTCGATTCA AGATTCTCTA AGCAAACTCA ACAGTTGACT
AGTTTCCATG ATTTAGATGT TAATACTATA CCTCTTATTA TTATCAATGC ATACGACTAT
AAAGGAAAAA ACATAAATAG TCCGTATGAT ATTCCATTAA GTGCTGATGT AGGCAGTCCG
AAATTGTCTC GTTCTGATGT CACTGATTTA ATTGATTATA TAAACAACGG TGGTAGTGTA
TTAATGATGG AGACTATCAT TAATACAAAT AACAGTGAGA TTTCTCGTTT ATTGGACAGT
GCTGGTATTG CTTTTGGCAT TGGAAACAGT GTAGTTGCTG ACGGTAATGG CCCGAGTGGA
GGCCACCCAG ATCGCCCACG TAGTCAGCGA GAGCACGGTA TTTGGGTTAT TGAGCGATAT
GCAGCTGTTG AAGACGAGTC TTCTGGTCAA CAGACGCTAC CTTATGTGAT TAATAGTGAT
GGTTCAATTG AGTGGAAGTA TATTGTAGAG AATAGGCCCG ATGATAAACC TAAACTTGAA
GTCGCGAGTT GGGTTGAATC TGAAGCTGGA GATAAATTAA TTACTCACTA TGCATTTATT
GATGAGTCTC AGCACTGGAA AAAAGATATT TCAGGTAAAA TAATCTATAA CGTGGCAGGG
AAGCCGGAAG TAGATAATGC ATCATTATCT TTGGCTAAAA ATAAAGTACT TGATGCTTTT
AAAAACAGTA GTGGCCAGAG AGCCTACTCT GAATGTAAAA ATTCTGAGTT TCATTATGAG
ATTAATTGCT TAGAATATCG TCCAGGTAAT TCAATTCCTA TTACTGGTGG TTTGTATGTA
CCCCGATATA CTGATATTAA GTTAGGAGAG TCTGAAGCCA ATGCTATGGT AAAGGCGGCT
AATCTTGGTA CAAATATTCA TGCTTTATAT CAGCATGAAC GTTATTTCCG AACTAAAGGA
AAGTCGGGAG CCCGTTTAAA TAGTGTTGAT TTGAATCGAA TTTATCAAAA TATGTCAGTA
TGGCTTTGGA ACGACCTTGA TTATCGTTAT GATGATAAGC AATCCGATGA GCTTGGATTT
AAAGTTTTTA CACAGTATTT GAATTGTTAC ACTAGTAACA ACGCTGGTGG TAATACAACT
TGCCCAGAAG AATTGAAAGA TGAACTTACT CAGCTAGGTA TGATTTATGA CGAAAAATCA
GGAAGCTATG CAGGTCAAAT GGATCCAAGT TACCCACTTA ATTATATGGA AAAGCCACTG
ACCCGTTTAA TGTTAGGGCG CTCATTCTGG GATCTTGATA TCAAAGTTGA TGTCAGAAAG
TACCCCGGTG AAGTCACAAC AAGATCAGGT GGAGGGGATA TTACTCTTGA CATGCGTAAT
AATACGGCAG CTTGGTTTGC GGGTAATAGG CAGCCGACAG GGCAGTGGGC CGAAGCTCAT
CAGCCTTTTA GTGTTTCAGT CTCAGGAGAA ACATCGCCTG TCACCATCAC CATTGCATTG
GCTGATGATT TAACTGGCCG AGAGAAGCAT GAGCTTGGTT TAAAGCGTCC TCCTCGCATG
AGCAAATCAT TTGTTATTGG CGGCGATAGT CCGAAAATGC AGACTTTTAC CGTACCCTAT
GGTGGGTTAA TATATGCACA AGGGGGAAAT TCTCAACAGG TCAAACTAAC ATTTTCAGGA
ACTATAGATG CACCGCTCTA TATTGACGGT AAGTGGAGAA ACCCTCTTTT ATCTGGCGCA
CCAATTGGTG AAGTAGTGTC AGACACCTTC ATATTTACTG CACCTAAAGC AAATTTAAAT
GCCGATGGTT ATTTGGGGGG GATCGAACAG TTTGCAAAAG ATCTTGATCA ATTCTCAGCG
GATTTAAACG ATTTTTATGC CCGTGATGAA GGTGCGGACG GTGACAAAAA TCGCAAAGCT
ACTGATAAGT CAATGCCTAA TAATCGTCAC CATTTCGTCA ATGATGTCGC AATAAGTGTT
GGTGCTGCAC ACTCTGGCTA TCCGGTCATG AATGATAGTT TTATTACCAG TAGCCGTAGT
TTGAACACTA TGCCGCTGAA CAGCTGGCTG CTTTGGCATG AGGTCGGGCA TAATTCAGCA
GAAGCTCCTT TTAATGTTGA TGGGGCCACA GAAGTTGTAA ACAACTTACT TGCCTTATAT
ATGCAAGATC GTCATCAAGG AAAAATGTCT CGTGTAGAAC AGGATATCCG TTATGCTTTC
GATTTTGTTA ATGCTGAGCA TGGGCATGCT TGGGGAGCCG GTGGTGCTGG TGAACGTTTA
GTTATGTTTG CGCAACTTAA AGAGTGGGCA GAAACTGAGT TTGATATAAA TGACTGGTAT
AATGATAAGC TACCTGGTTT TTATATTGAA GAAAGCGGAA TAAAAGGTTG GAACTTGTTT
AAACTGATGC ATCGGTTAAT GAGAAATGAG AACGATGACC AAATCAATAT GAAGGGAGAA
AATCAATGTA AGATATCTGG TATTGGTAAA AGTGATCTAT TAATGCTTTG TGCATCATAT
GCCGCTCAGA CGGATTTGTC AGAATTTTTT AAAGCATGGA ATCCGGGAAG TAAGGCATTT
CTCTATCCAG ATGATCCTCA GCCATATTAC GAAGGAGGAA TAACTCCTTC TGGGATTCAG
AGAGTCAAAT CTTTAAAATT GAATCTTCCC CAAAAAAATC CCCTTTCTAT AAACAGTGTT
ACACAACATT AG
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| Protein sequence | MPLIFQISQK DNVFCTINGR SIATFTAPFD ANKNGRNTDS EVLSLISADE YRDSPVRQEN
LQILMKNMAT IHGDKISLVF RSTLDALTFE NYLRHNLDLP KDQFLEAITE KIANDNQVDK
QPSTHVPNIS PSFTPGTSSN LNSPFVSANA EESLSYIPTD VIPSLGRLLD SQGRVINGVS
YFSNNTRGIT GVDKTGAILN DGSFEFSWGD IISFSIDTFE LGSTRANKTD FYISELGKDN
EGKNAEALIH RYASIDDSKL IIPDKVTQIF SLYPNVINEV ISLSLPNGDI ELDIGDGKTQ
IVPGEFFKQF DSGLAALIDQ SISPISRFKF EDSLPKKKSA IDSESSQIQD IINKLWGATD
TVQANGWKKV DRFHIFHDST NFYGSTGSAR AQAAVNIANS AFPVLMARND NNYWIDFGKP
KAWDSNSLAF ITEAPSTVVP DKVSEDTSTF NLPFISLGEI GKGKLMVLGN ARYNSVLVCP
NGFSWGGTVK NGTCSLSSDR DDMANFFSNV IRYLTGSTSN DVIVGTNIPE VYFKSSGQTM
GSKANFELDS RFSKQTQQLT SFHDLDVNTI PLIIINAYDY KGKNINSPYD IPLSADVGSP
KLSRSDVTDL IDYINNGGSV LMMETIINTN NSEISRLLDS AGIAFGIGNS VVADGNGPSG
GHPDRPRSQR EHGIWVIERY AAVEDESSGQ QTLPYVINSD GSIEWKYIVE NRPDDKPKLE
VASWVESEAG DKLITHYAFI DESQHWKKDI SGKIIYNVAG KPEVDNASLS LAKNKVLDAF
KNSSGQRAYS ECKNSEFHYE INCLEYRPGN SIPITGGLYV PRYTDIKLGE SEANAMVKAA
NLGTNIHALY QHERYFRTKG KSGARLNSVD LNRIYQNMSV WLWNDLDYRY DDKQSDELGF
KVFTQYLNCY TSNNAGGNTT CPEELKDELT QLGMIYDEKS GSYAGQMDPS YPLNYMEKPL
TRLMLGRSFW DLDIKVDVRK YPGEVTTRSG GGDITLDMRN NTAAWFAGNR QPTGQWAEAH
QPFSVSVSGE TSPVTITIAL ADDLTGREKH ELGLKRPPRM SKSFVIGGDS PKMQTFTVPY
GGLIYAQGGN SQQVKLTFSG TIDAPLYIDG KWRNPLLSGA PIGEVVSDTF IFTAPKANLN
ADGYLGGIEQ FAKDLDQFSA DLNDFYARDE GADGDKNRKA TDKSMPNNRH HFVNDVAISV
GAAHSGYPVM NDSFITSSRS LNTMPLNSWL LWHEVGHNSA EAPFNVDGAT EVVNNLLALY
MQDRHQGKMS RVEQDIRYAF DFVNAEHGHA WGAGGAGERL VMFAQLKEWA ETEFDINDWY
NDKLPGFYIE ESGIKGWNLF KLMHRLMRNE NDDQINMKGE NQCKISGIGK SDLLMLCASY
AAQTDLSEFF KAWNPGSKAF LYPDDPQPYY EGGITPSGIQ RVKSLKLNLP QKNPLSINSV
TQH
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