| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0337 |
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| Symbol | |
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| ID | 5136818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 357596 |
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| End bp | 360535 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640531795 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_001216293 |
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| Protein GI | 147675167 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGAGTG ATAGACAAAG TTTTCTGTAT TCAGGTCATA AGCTCTCTTC TGGTGGTGCA
AACGATCCGC TCCTACCAAG ACTTGTCCAA GCCATTAATC ACGCGACTGA AATTGAAATT
TCAGTCTCAT TCATTCAGCC ATCCGGTCTG GATTTACTGT TTGATCCTCT GTTTGATGCT
GTGCAAAGTG GTGCTCAGGT AAAACTCCTA ACATCAGATT ATCTCTCGAT TACTCATCCT
GTTGCGCTGC GACGCCTAAT GTTGCTAACA GAACGCGGCG CTCAGTGTCG TGTATTTGAA
TGTGGTCAGC ACAGCTTTCA TATGAAATCG TACATTTTTG TCCGATGTGA ACAGGGAGAA
ATACTTGAAG GTTGCGCTTG GATTGGTTCC AACAACATCA GCAAAACAGC GTTATTAGAC
AGCCATGAAT GGGCTCTACG TCACGACTTT GAACCACCTG AAACCAGTGC TGCTGCCCTT
GAGTTTCTCC ATATTCGTCA ACAGTTTGCT TCCATTTTCA ACCACACAAA TAGTAAAGAT
TTAACGCATA CTTGGATTGA TCATTACCTT GAACGCTATC AACAAGCGAA AAAGCAGCAC
GGCATGCCCA TACTGGCCGA TAGCCAAGAT GAACAGTCAG AACCGCCAGC GCCGAATGCA
GTTCAAGTAG AGGCGTTAAC CGCATTGAAC GCCACTAGAG CCCAAGGATT TTCTCGTGGA
TTAGTCGTGC TAGCTACGGG CATGGGCAAA ACGTGGTTAG CAGCATTTGA TGCTCTACAA
ACTCAGTCGA CAAAAGTCTT GTTCGTTGCG CATAGAGAAG AAATTCTTCT GCAAGCGGAA
AAAACCTTCT GTCAGCTTAT TCCCAATGCA AAAACGGGTC TCTACAACGG TGTAACGCAA
AATACACAAG CGATGCTGCT GTTTGCTTCC GTGGCAACCA TAGGTAAACA AAATCACCTG
CAACGCTTTG CAGCGGATCA CTTTGATTAC ATTGTGGTGG ATGAATTTCA TCACGCGGCA
GCGAGAAGTT ACCGAAACTT ACTCACCTAT TTTAAGCCTA AATTTCTCCT CGGCCTAACC
GCAACACCGG AACGTTCAGA TCAAGCGGAT ATTCTCTCGC TTTGCGACAG TAATTTAGTC
TTTGAACGTA ACCTTGTTCA TGGAATTGAT GAGAAAATTC TGGTTCCTTT TGACTATCAC
GGTATCTACG ACCAAGCCGT GAACTACCAA GAAATCCCAT GGCGTAACGG TAAATTCGAC
CCAGACTCAC TCGATAATGC CCTAGCAACT CAACGCCGTG CCGAACACGT TTACCAGCAT
TGGCACCAGA AAAAACAAAC CCGCACACTG GCTTTTTGTG TTTCTAAAAA ACACGCAGAC
TTCATGGCTG AGTTTTGTCT GAGTAAAGGC ATAAAAGCGA TTGCGGTTTA CAGTGATTCA
AAGGTTCGAC GTAACCAAGC CTTACAGTGG CTAGATTCAG GAAAAATAGA CATCCTTTTC
TCCGTCGATC TTTTTAATGA AGGTACCGAT CTGCCCGCTA TTGATACCAT TTTGATGCTT
CGTCCAACGG AGTCTAAAAT TCTCTTTTTA CAGCAGTTGG GACGGGGATT GCGTCGAAGC
ATTGAAACTC AAAAAAGTAA ACTGGTTGTT ATTGATTTTA TTGGTAATCA TGACTCGTTC
TTAAATCGTC CAACCACACT CTACAATGTG AGTCATTTAA AAGACGCCTT AGCCAAACAC
CAACAACAAG CATTACCTGA CGGATGCCAT GTCACTTTTG ATATCACTTT GCTCAACTTT
TGGCAGCAAT TAACCCGGAA AATGCGTTTC TCAGTGCAAG ATGAGTATCA GCAACTTGCA
CACCAGCTCG CACATAGACC AACTGCTAGT GAGTTTTTCT ATCATGGAAT TGAAATAAGT
AAAGTGCGTA AACAAGCGCA AAGCTGGTTT CATTTGGTTG CGAGCCAAGA AAATGATCCC
GAGTTGGCTG AGATTGTTAC ACGCTATGGT GATTTTCTTC TGCATGGCAT TGAAAGCACC
AGCATGAGTA AATCTTTCAA AGCAATTCTA CTTGAGGCCT TACTCGAACT GGATGGATTA
AGAACTCCGC CGACCTTAGC CACATTGGCT GAATGCAGTT ACACTGTTAT CGCACGCAGA
CCAGACCTCA TGGCTGAAGA CCTAACTGAA AATGCCAAAC AATTTAAAGC AGCAGATAAA
GATTGGCTTA ACTATTGGCG GAACAACCCT ATTAAGGCCT TTACGAACAA AGCAACGAAA
CAGGCCACTT GGTTTTCCAT CGATAGCCAA CAACGCTTCG TCGCTAACTT TGATATCCGA
GAGCAAGATC TAGAACGGTT ACACGATTGT ATACAAGAAT TGGTTGATCT GCGTTTGGCG
GAATATGCTC AGCGACCCAA GCAACATAAA GAAAATCTTA TTAAGGCTAA GAGCAAAGCT
GCTGTCATTT CATTAATACC TGAACAAAAA ACGATAGGAA CACCTATCCC ATTCTATCCA
GAGCTCAAAA TTGCCTGTGG CCATTTTAAG CGCGGTTCAG AGCGAGAAGT ACAGACTTAT
TTTGTTCCTG ATGGCTATGG ATTACTTGAT CCCACACGGC ATTTTGTCTC GCCAGCCTCT
GGTAACTCAA TGAATGGCGG TAAAAATCCT ATTCAAGATG GTGACTTATT ATTGCTTGAG
TGGGTGACAC CAAGCAGTGC TGGCTCTATA TCAAACCTCA CCATGGCTAT AGAAACTCAA
GATGAAACGG GGGATAACCA GTACTTACTG CGGGTAGTAC GTAAAATCGC ACCAAACCAG
TATGAACTAC AAGCACAAAA TCCAAGTTAT CCAAATATGC CAGCAACCGA TGCAATGAAA
ACGTTCGCAC GGTTAAAAGC TGTGATAAAA AATAATAGTC AGCAATCACA GACTCGATGA
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| Protein sequence | MMSDRQSFLY SGHKLSSGGA NDPLLPRLVQ AINHATEIEI SVSFIQPSGL DLLFDPLFDA
VQSGAQVKLL TSDYLSITHP VALRRLMLLT ERGAQCRVFE CGQHSFHMKS YIFVRCEQGE
ILEGCAWIGS NNISKTALLD SHEWALRHDF EPPETSAAAL EFLHIRQQFA SIFNHTNSKD
LTHTWIDHYL ERYQQAKKQH GMPILADSQD EQSEPPAPNA VQVEALTALN ATRAQGFSRG
LVVLATGMGK TWLAAFDALQ TQSTKVLFVA HREEILLQAE KTFCQLIPNA KTGLYNGVTQ
NTQAMLLFAS VATIGKQNHL QRFAADHFDY IVVDEFHHAA ARSYRNLLTY FKPKFLLGLT
ATPERSDQAD ILSLCDSNLV FERNLVHGID EKILVPFDYH GIYDQAVNYQ EIPWRNGKFD
PDSLDNALAT QRRAEHVYQH WHQKKQTRTL AFCVSKKHAD FMAEFCLSKG IKAIAVYSDS
KVRRNQALQW LDSGKIDILF SVDLFNEGTD LPAIDTILML RPTESKILFL QQLGRGLRRS
IETQKSKLVV IDFIGNHDSF LNRPTTLYNV SHLKDALAKH QQQALPDGCH VTFDITLLNF
WQQLTRKMRF SVQDEYQQLA HQLAHRPTAS EFFYHGIEIS KVRKQAQSWF HLVASQENDP
ELAEIVTRYG DFLLHGIEST SMSKSFKAIL LEALLELDGL RTPPTLATLA ECSYTVIARR
PDLMAEDLTE NAKQFKAADK DWLNYWRNNP IKAFTNKATK QATWFSIDSQ QRFVANFDIR
EQDLERLHDC IQELVDLRLA EYAQRPKQHK ENLIKAKSKA AVISLIPEQK TIGTPIPFYP
ELKIACGHFK RGSEREVQTY FVPDGYGLLD PTRHFVSPAS GNSMNGGKNP IQDGDLLLLE
WVTPSSAGSI SNLTMAIETQ DETGDNQYLL RVVRKIAPNQ YELQAQNPSY PNMPATDAMK
TFARLKAVIK NNSQQSQTR
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