Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0325 |
Symbol | citE |
ID | 5137669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 345303 |
End bp | 346178 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640531783 |
Product | citrate lyase, beta subunit |
Protein accession | YP_001216281 |
Protein GI | 147673483 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | [TIGR01588] citrate lyase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAAC TTCGTCGCAG TATGTTATTT GTGCCGGGCG CGAATGCCGC CATGCTCAGT AATACCTTTA TCTATCAACC GGATTCGATC ATGTTCGATC TGGAAGATTC GGTCGCGCTG CGTGAAAAAG ACACCGCGCG GATGTTGGTG TTCCATGCGC TGCAACACCC TATGTATCAA GAGATGGAAA CCGTGGTGCG GGTCAATCCG CTCGATTCTG AATTCGGCAT CAAAGACCTT AATGCCGTGG TGCGCGGCGG AGCCAAAGTG GTGCGTCTGC CGAAAACCGA TAACGCCAAC GATGTGATTG AGATGGAAAA AGTCATCGAG CAGATCGAGC GTGAATGCGG ACGTGAAGTG GGTAGCACGC GTATGTTGGC CGCGATTGAA AGCGCGCAAG GCATCAACAA CGCGGTTGAG ATTGCCTTTA GCTCCCGCCG CCTGATTGGG ATTGCGCTCG GCGCGGAAGA CTATGTGCGC GATCTGCGCA CGCAGCGTTC AGCGGAAGGG ATTGAGCTGC TGTTTGCACG CGGCTCCATT CTGCAAGCGG CGCGTGCTGC CGGGATCATG GCGTTTGATA CCGTCTATTC CGATGCCAAT AACGAAGAGG GATTTTTGCG TGAGGCGGAG CACATCAAGC AGCTTGGCTT TGATGGCAAG TCACTGATTA ACCCGCGCCA GATTGACCTG CTGCACAACG TGTTTGCCCC AACCCAAAAA GAGGTCGATC ACGCCATCGC AGTCATCGAA GCCGCCGAAG AAGCCGCGGC GAAAGGGCTG GGCGTGGTTT CCCTTAACGG CAAAATGGTC GATGGGCCCA TCATCGAACG CGCACGTTGG ACACTGCAAC GTGCTGAATC CGGCACCAAA CACTAA
|
Protein sequence | MTKLRRSMLF VPGANAAMLS NTFIYQPDSI MFDLEDSVAL REKDTARMLV FHALQHPMYQ EMETVVRVNP LDSEFGIKDL NAVVRGGAKV VRLPKTDNAN DVIEMEKVIE QIERECGREV GSTRMLAAIE SAQGINNAVE IAFSSRRLIG IALGAEDYVR DLRTQRSAEG IELLFARGSI LQAARAAGIM AFDTVYSDAN NEEGFLREAE HIKQLGFDGK SLINPRQIDL LHNVFAPTQK EVDHAIAVIE AAEEAAAKGL GVVSLNGKMV DGPIIERARW TLQRAESGTK H
|
| |