Gene VC0395_A0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0325 
SymbolcitE 
ID5137669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp345303 
End bp346178 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content55% 
IMG OID640531783 
Productcitrate lyase, beta subunit 
Protein accessionYP_001216281 
Protein GI147673483 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC TTCGTCGCAG TATGTTATTT GTGCCGGGCG CGAATGCCGC CATGCTCAGT 
AATACCTTTA TCTATCAACC GGATTCGATC ATGTTCGATC TGGAAGATTC GGTCGCGCTG
CGTGAAAAAG ACACCGCGCG GATGTTGGTG TTCCATGCGC TGCAACACCC TATGTATCAA
GAGATGGAAA CCGTGGTGCG GGTCAATCCG CTCGATTCTG AATTCGGCAT CAAAGACCTT
AATGCCGTGG TGCGCGGCGG AGCCAAAGTG GTGCGTCTGC CGAAAACCGA TAACGCCAAC
GATGTGATTG AGATGGAAAA AGTCATCGAG CAGATCGAGC GTGAATGCGG ACGTGAAGTG
GGTAGCACGC GTATGTTGGC CGCGATTGAA AGCGCGCAAG GCATCAACAA CGCGGTTGAG
ATTGCCTTTA GCTCCCGCCG CCTGATTGGG ATTGCGCTCG GCGCGGAAGA CTATGTGCGC
GATCTGCGCA CGCAGCGTTC AGCGGAAGGG ATTGAGCTGC TGTTTGCACG CGGCTCCATT
CTGCAAGCGG CGCGTGCTGC CGGGATCATG GCGTTTGATA CCGTCTATTC CGATGCCAAT
AACGAAGAGG GATTTTTGCG TGAGGCGGAG CACATCAAGC AGCTTGGCTT TGATGGCAAG
TCACTGATTA ACCCGCGCCA GATTGACCTG CTGCACAACG TGTTTGCCCC AACCCAAAAA
GAGGTCGATC ACGCCATCGC AGTCATCGAA GCCGCCGAAG AAGCCGCGGC GAAAGGGCTG
GGCGTGGTTT CCCTTAACGG CAAAATGGTC GATGGGCCCA TCATCGAACG CGCACGTTGG
ACACTGCAAC GTGCTGAATC CGGCACCAAA CACTAA
 
Protein sequence
MTKLRRSMLF VPGANAAMLS NTFIYQPDSI MFDLEDSVAL REKDTARMLV FHALQHPMYQ 
EMETVVRVNP LDSEFGIKDL NAVVRGGAKV VRLPKTDNAN DVIEMEKVIE QIERECGREV
GSTRMLAAIE SAQGINNAVE IAFSSRRLIG IALGAEDYVR DLRTQRSAEG IELLFARGSI
LQAARAAGIM AFDTVYSDAN NEEGFLREAE HIKQLGFDGK SLINPRQIDL LHNVFAPTQK
EVDHAIAVIE AAEEAAAKGL GVVSLNGKMV DGPIIERARW TLQRAESGTK H