Gene VC0395_A0323 details

Gene Information

• Locus tag: VC0395_A0323
• Symbol: citC
• ID: 5136182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 343888
• End bp: 344958
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640531781
• Product: citrate (pro-3S)-lyase ligase
• Protein accession: YP_001216279
• Protein GI: 147674487
• COG category: [C] Energy production and conversion
• COG ID: [COG3053] Citrate lyase synthetase
• TIGRFAM ID: [TIGR00124] [citrate (pro-3S)-lyase] ligase; [TIGR00125] cytidyltransferase-related domain

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGAAGC CGACCATGGT GGATATTTAT ACCTTCTCGC GAGTTTCAAC CAAGAATCGA 
ACCAAGCTCT TACAGATCAA AGAGTTTCTC TGCCAGCATC AGCTGACCGT GGATGACGAT 
GTCGAGCATT TTGTGGTGGC TTATGGCACA AACCAAATCA TCGCTTGCGG CGGAATTGCG 
GGGCACGTGT TGAAGTCCAT CGCGGTTTCT CCTGCGCTGC AAGGCACTGG TTTTGCGCTC 
AAACTGATGA CCGAATTAAC CAACTTCGCT TATGAAATGG GGCGTTTTTC ACTCTTTCTA 
TTTACTAAGC CAGCCAATAT TGATTTATTT AGACAGTGTG GTTTTTTCTT GGTCGATAAA 
GTCGAACCGC ATATTGCTTT ATTAGAAAAT AGCCCTAATC GCCTTTCTGT TTATTGCAAA 
CAGTTGCAGT TATTAAAAAT GTCTGGCCGT AAAATTGGCA GTATTGTGAT GAATGCCAAT 
CCATTTACCT TAGGTCATCA ATATTTAATT GAACAAGCCT GTGAACAATG TGACTGGGTG 
CATTTATTTG TTGTAAAAGC AGAGAATAAA GATTTTTCTT ACGCTGATCG CATGGCCATG 
ATTAAGGCGG GTAGTAAACA TTTATTGAAT TTAACTATTC ATTCCGGTTC AGATTATATT 
ATTTCGCGCG CGACCTTCCC CAGTTATTTT ATTAAAGATC AGCAAGTGGT CAATCAATCC 
CATACCGCGC TGGATTTAAG TATTTTCCGC CATTCGATCG CGCCTGCCCT TGGCATTACG 
CACCGCTTTG TCGGTAGTGA GCCGATTTGT ACGGTGACGC GTCACTACAA CCAAGCCATG 
CGCCGCTGGC TAGAAGAAGC GCACGATGCC AGTGCGTCGA TCCAAGTGGT TGAAATTGAG 
CGCAGTCAGC AAGCCTCGCA GCCAATTTCA GCATCGCGCG TGCGTTACTT GCTCAAACAA 
TTTGGCGTTG CTGCGATTGC CGATCTCGTG CCAAAAACGA CCTATTCCTA CCTTTGCCAG 
CACTATGCGG AACATTCGCT ACAGACCGCA CCGCAACGGT TAGCGGTATG A 

 

Protein sequence

MRKPTMVDIY TFSRVSTKNR TKLLQIKEFL CQHQLTVDDD VEHFVVAYGT NQIIACGGIA 
GHVLKSIAVS PALQGTGFAL KLMTELTNFA YEMGRFSLFL FTKPANIDLF RQCGFFLVDK 
VEPHIALLEN SPNRLSVYCK QLQLLKMSGR KIGSIVMNAN PFTLGHQYLI EQACEQCDWV 
HLFVVKAENK DFSYADRMAM IKAGSKHLLN LTIHSGSDYI ISRATFPSYF IKDQQVVNQS 
HTALDLSIFR HSIAPALGIT HRFVGSEPIC TVTRHYNQAM RRWLEEAHDA SASIQVVEIE 
RSQQASQPIS ASRVRYLLKQ FGVAAIADLV PKTTYSYLCQ HYAEHSLQTA PQRLAV