| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0314 |
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| Symbol | |
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| ID | 5135478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 334446 |
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| End bp | 335378 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531772 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001216270 |
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| Protein GI | 147673540 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA GCCAGCAAGT TGCCAGTCTG CATACTTTTA TGCAGGTAGC TCAATACACC
AGCTTTAGTT TAGCTGCTGC GGCTCTCCAT CTCACCACGG GGGCGATCAG CCAACAAATG
TTGCAGTTAG AAGCGCAGTT GGGTTTTAGC TTATTTGAAC GGCACTCTCG CGGGGTACGT
TTAACTGAGG CAGGACGAAT CTTACTGACA ACGGTGCAAC GTAGCTATCA AGATATTGAG
CAGACAATTC ACAGTTTAGT GCCATCAACG GAGCGAAAAG AGATCCGGCT GAAACTGACG
CCATCATTTG CGTTTAAATG GTTGGTTCCG CGGCTAGAGG ACTTTTATCG CCGTCATCCT
GAGATTCAGA TTCAGACGTT CGCGGAAGGC GCGTTGGTCG ATAGTGAGCG GCGTGATTAC
GATCTGGCGA TTGATTATGG CGCGTTACCT TATCCACGGC GAGATGCGCA GTTATTGATG
GAGGAGTGGT TATTGCCCGT GATGAGCACG AACTATCTCG CAGCCCATTC TTGGTTACAG
GAGGATTGGG CTAACTCCGA AGCTTGGCAG CAAGTGGTTT TATTGCATGA TGCAATGCCG
TGGGCGAATG CGGCACGCGA CCAAGAGTGG CACTACTGGG CTCACCAGAT GGGAATTACC
TTGCCTGAGC GGCGTGATCA CTACTTCAAC CGCACGGATA TGGCGATGTC AGCTGCAGAG
GCCGGAGTGG GGATTGCAAT GGCGCGTACT GCCTTACTTT CAAACGAACT CGATACAGGG
CGTTTGGTTA CCCCGTTTGC TCCCATTCGA GCCAAGGCTG GCTACTTTTT GATTACTCAC
CAAGCCACTG ACGCGACGCA AGTTTTTTGC CAGTGGTTGC AAAAGCAAAT TCCGGTGCAG
GTTAGCCAAA CCGATCGCGA TTCTACGCTA TAG
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| Protein sequence | MLKSQQVASL HTFMQVAQYT SFSLAAAALH LTTGAISQQM LQLEAQLGFS LFERHSRGVR
LTEAGRILLT TVQRSYQDIE QTIHSLVPST ERKEIRLKLT PSFAFKWLVP RLEDFYRRHP
EIQIQTFAEG ALVDSERRDY DLAIDYGALP YPRRDAQLLM EEWLLPVMST NYLAAHSWLQ
EDWANSEAWQ QVVLLHDAMP WANAARDQEW HYWAHQMGIT LPERRDHYFN RTDMAMSAAE
AGVGIAMART ALLSNELDTG RLVTPFAPIR AKAGYFLITH QATDATQVFC QWLQKQIPVQ
VSQTDRDSTL
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