| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0300 |
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| Symbol | vibB |
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| ID | 5135966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 316910 |
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| End bp | 317791 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531758 |
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| Product | vibriobactin-specific isochorismatase |
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| Protein accession | YP_001216256 |
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| Protein GI | 147674293 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1535] Isochorismate hydrolase
[COG3433] Aryl carrier domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTC CTAAAATCGC TTCTTACCCT TTACCCGTAT CATTACCGAC TAATAAAGTC
GATTGGCGCA TTGATGCATC GCGGGCGGTA CTGCTTATCC ATGATATGCA GGAGTACTTT
GTACACTATT TTGACTCGCA GGCAGAACCC ATCCCAAGTT TAATCAAGCA TATACAACAG
CTTAAAGCTC ATGCCAAGCA AGCGGGGATC CCTGTGGTCT ATACGGCTCA ACCCGCGAAT
CAAGATCCTG CCGAGCGAGC ACTATTGAGC GATTTTTGGG GGCCCGGTTT GAGTGAAGAG
ACGGCGATCA TTGCGCCTCT TGCTCCAGAA TCAGGTGATG TTCAGCTCAC CAAATGGCGT
TATAGCGCGT TTAAAAAGTC GCCGTTATTG GATTGGCTGC GTGAAACAGG GCGGGATCAG
TTAATCATTA CGGGTGTCTA TGCGCACATT GGCATTCTCT CGACTGCGTT GGATGCCTTT
ATGTTCGATA TTCAGCCTTT TGTGATTGGG GATGGCGTGG CAGATTTCTC GCTCAGTGAT
CACGAATTCA GTCTGCGTTA TATCAGTGGT CGTACTGGTG CGGTCAAATC CACTCAACAA
GCGTGTTTAG AGATTGCCGC CCAACACTCA AAGCTTACTG GCTTAAGCTT GCGAACCATG
CAACACGATG TGGCCGCTGC GCTCAATCTG AGTGTGGATG AAGTGGATGT GCAGGAGAAT
CTTCTGTTTC TCGGTTTAGA TTCGATTCGC GCGATTCAGT TGTTGGAAAA ATGGAAAGCC
CAAGGTGCTG ATATTAGCTT TGCTCAACTG ATGGAGCATG TCACTTTGCA GCAGTGGTGG
CAGACCATTC AAGCCAATTT ACATCAACCT TGCTCTGCGT GA
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| Protein sequence | MAIPKIASYP LPVSLPTNKV DWRIDASRAV LLIHDMQEYF VHYFDSQAEP IPSLIKHIQQ
LKAHAKQAGI PVVYTAQPAN QDPAERALLS DFWGPGLSEE TAIIAPLAPE SGDVQLTKWR
YSAFKKSPLL DWLRETGRDQ LIITGVYAHI GILSTALDAF MFDIQPFVIG DGVADFSLSD
HEFSLRYISG RTGAVKSTQQ ACLEIAAQHS KLTGLSLRTM QHDVAAALNL SVDEVDVQEN
LLFLGLDSIR AIQLLEKWKA QGADISFAQL MEHVTLQQWW QTIQANLHQP CSA
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