| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0227 |
|---|
| Symbol | tyrA |
|---|
| ID | 5137799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 235397 |
|---|
| End bp | 236524 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640531687 |
|---|
| Product | bifunctional chorismate mutase/prephenate dehydrogenase |
|---|
| Protein accession | YP_001216190 |
|---|
| Protein GI | 147674187 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTAG AGTTGAATCA GTTACGCGAC CAAATCGATG AAGTCGATAA GCAGATGGTG
GAGCTACTGG CGCGCCGTCT GGCATTGGTG GAGCAGGTCG GGCAAGTGAA AAGTCGATAT
GGGTTACCGA TTTATGCTCC CGATCGTGAA GCGGCAATGC TCGCTTCACG TCGAGCGGAA
GCGGAAAGCA AAGGTGTTCC GCCACAACTG ATTGAAGATA TTTTGCGCCG AACCATGCGT
GAATCCTACG CCAGTGAAAA GGACTCCGGC TTTAAATGCC TCAATCCTGA GTTACGTTCC
GTGGTGATCA TCGGTGGTAA CGGTCAGCTT GGGCGACTAT TTGGCCGTAT GTTTAAACTC
TCTGGCTATC AAGTCAAAGT GCTGGGTAGC CAAGATTGGG ACAAAGCGGA TGAACTGCTC
AGTGATGCTG GCTTAGTGAT AGTCACGGTA CCTATCCATT TGACGCTCGG TGTTATCGAA
AAGCTGCGCC AGTTGCCGGA CGATTGCATT TTGTGCGATC TCACCTCAAT CAAAGCCAAG
CCGCTTGCCG CTATGCTACA AGTGCACAAA GGTCCAGTGG TTGGGCTGCA CCCTATGTTT
GGCCCTGATG TTCCAAGCCT GGCGAAGCAG GTGATTGTTT ACTGTGATGG TCGAGGCAAT
GAACACTACC AATGGCTCTT GCAACAGTTT GCTATTTGGG GTGCAAGCTT GTGTCAGATT
GATGCGACTG AACATGATCG TGGTATGACG CTTATTCAAG CTCTGCGCCA CTTCACTTCC
TTTGCTTATG GCTTGCATCT GACCAAAGAG AACCCGAACT TGGCACAACT GCTGAAACTC
AGTTCACCGA TTTACCGTTT AGAGCTTGCT ATGGTCGGAC GGCTATTTGG GCAAGATCCC
CATCTATACG GCGATATTAT TCTCTCATCA CCAGAAAATA TTGAGATGAT CCAGCGTTTT
CATCGCTGCT TAAGCGAGGC GGTTGAGTTG GTGAGCGCGG GCGATAAGGC GAGTTTTGTG
GCTCAATTTG AACGAGTTAG CCAGTGGTTT GGTGATTATT CACAGCAGTT TATGCATGAG
AGCCAAAACT TGCTCAAACA AGCGAATGAT GCGATCCACA GAGGTTAA
|
|---|
| Protein sequence | MAVELNQLRD QIDEVDKQMV ELLARRLALV EQVGQVKSRY GLPIYAPDRE AAMLASRRAE
AESKGVPPQL IEDILRRTMR ESYASEKDSG FKCLNPELRS VVIIGGNGQL GRLFGRMFKL
SGYQVKVLGS QDWDKADELL SDAGLVIVTV PIHLTLGVIE KLRQLPDDCI LCDLTSIKAK
PLAAMLQVHK GPVVGLHPMF GPDVPSLAKQ VIVYCDGRGN EHYQWLLQQF AIWGASLCQI
DATEHDRGMT LIQALRHFTS FAYGLHLTKE NPNLAQLLKL SSPIYRLELA MVGRLFGQDP
HLYGDIILSS PENIEMIQRF HRCLSEAVEL VSAGDKASFV AQFERVSQWF GDYSQQFMHE
SQNLLKQAND AIHRG
|
|---|
| |