| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0179 |
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| Symbol | |
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| ID | 5137608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 183286 |
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| End bp | 184197 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531639 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_001216142 |
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| Protein GI | 147674411 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATGGT TTCGATTCCC GATAGCGGTG ATAGGATTGG TTCTGCTGTC AGGGTGTGCC
ACGCAGAATG AATCTGCAAC CCAATGGCTT TACCCGCCAA TGGCGGTGCC GCTGCAAGCG
TCGATTCAAC AAGAAGTGCA AATCGCCCGC TTAAGCCAAT TATTACAGCG CACGGATCTT
GAGCCTGAGA TACGCGCTAA AATGCTGTTC GAACGTGGCA ATTATTACGA CAGTGTCGGT
TTACGTGATT TGGCTCGGCT CGATTTTACT CAATCGCTCT CGATTAACCC TGCGCAGCCC
GATGTGTTTA ACTTGCTAGG GGTGTATTAC ACCGAAGCGG GCGAGTTTGA CGCCGCGTAT
GAATCCTTCG ATTCGACGTT AGAATTGGAT CCTAGTAACG AGTATGCCGT GCGCAATCGC
GCCATCGCGC TTTACTATGG CGAGCGCCCA CAACTGGCAC TCGAAGAGAT CACTAAGCAC
TATCAACAAG ACCCACAAGA TCCTTTTCGG GCGCTGTGGC TGTACATCAT AGAAAGCGAT
ATTGACCTGA CAAAAGCGCG TACAGAACTG CTTGAACGCT ATCAGCAGCA CGATGAACAG
TGGGGCTGGG TGCTGGTAGG ACTGATGTTG GATCAACTCT CGGAAGAGGT CGCATTCAAA
GCCATTATTG CGGGCTCTCG AGAAAATGAG CTATTAGCAC AGCGCCTCAC AGAGGCTTAT
TTCTACCTAG GTAAGCGTTA TCAAATGCAA GGAGAACTGG CCCATGCTCT CTCTTTGTAT
AAGCTCGCGA TTTCCTTCAA TGTGTATGAA TATGTGGAGC ATCGCTATGC TTTTCTTGAG
CTAGGGCACA TCTATCAACA AGCCCGTGAA GAGCAGTTAG CGCGCGCGAA AGCCGAAGCA
ATGACACAAT AG
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| Protein sequence | MKWFRFPIAV IGLVLLSGCA TQNESATQWL YPPMAVPLQA SIQQEVQIAR LSQLLQRTDL
EPEIRAKMLF ERGNYYDSVG LRDLARLDFT QSLSINPAQP DVFNLLGVYY TEAGEFDAAY
ESFDSTLELD PSNEYAVRNR AIALYYGERP QLALEEITKH YQQDPQDPFR ALWLYIIESD
IDLTKARTEL LERYQQHDEQ WGWVLVGLML DQLSEEVAFK AIIAGSRENE LLAQRLTEAY
FYLGKRYQMQ GELAHALSLY KLAISFNVYE YVEHRYAFLE LGHIYQQARE EQLARAKAEA
MTQ
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