Gene VC0395_A0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0074 
Symbol 
ID5136530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp70096 
End bp71283 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content48% 
IMG OID640531534 
Productaspartate kinase 
Protein accessionYP_001216047 
Protein GI147674175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000101932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGC CCCTTATCGT GCAAAAGTTC GGCGGAACTT CGGTGGGTTC AATAGAAAGA 
ATGCAAACCG TAGCCGAACA CATCATTAAG GCGAAGAATG ATGGCAATCA AGTTGTCGTA
GTGGTCTCTG CCATGGCAGG GGAAACCAAT CGACTGGTGG GTTTAGCTCA ACAAGTAGAT
AGCGTACCAA ACGCTAGAGA ACTTGATGTT TTGCTCTCTG CTGGTGAGCA GGTGTCAATG
GCCTTAGTGG CAATGACACT GCACAAAATG GGCTATGCCG CCCGCTCACT AACCGGAGCT
CAAGCGAATA TTGTGACGGA CAATCAACAC AATGACGCGA CGATTAAACA TATTGATACT
CGAACGATTA CCGAGTTGCT AGAACAAGAT TTTATTGTGA TAGTCGCGGG TTTTCAGGGC
ATTAATGAAA ATGGGGATAT CACTACGTTA GGCCGTGGTG GCTCAGACAC CAGTGCTGTG
GCATTGGCTG GGGCACTGAA TGCCGACGAA TGCCAAATAT TCACTGATGT CGATGGGATA
TACACTTGTG ATCCACGCAT TGTACCAAGT GCTCGTAAGC TGGATGTGAT TGATTTTCCT
TCCATGGAAG AGATGGCGCG CAAAGGTGCA AAAGTGTTGC ACCTACCGTG CGTGCAGTAT
GCTTGGAAGC ATGCAGTGCC ACTCAGAGTG CTCTCTACCT TTGAAGTGAA CCAAGGCAGT
TTAATTAAAG GCAGTGCCGC AACTCACGCA GTATGTGGTA TTGCTCTTCA GCGCGATATG
GCGCTGATAA GAGTGGAGAG TGAATCTTTC CCAAGCATCA TCAAGCAGTG CCAAATGCTC
GGCATTGAAG TCTGCACAAC CATTGAAGAG CCTACCAATA GTGCATTTGT GATTAAACGC
GATGCTTATG CCAAGCTACA ATTAGTCGGC GCAGATAAAA TTCGTGGTTC AGAGCCCGTG
AGCCTCATCA CCAAGGTCGG TATACAAGCC GGGGCATTAG TTGCCCATGC ACGTCAGACC
TTAGCGCAAC ATGGCATCGA TGTGCGTTAT GTCTCGGCCT CGGAACAATC ATCTATGCTA
ATGTTAGACC CTGCAAATGT GGATCGTGCG GCAAATATTT TGCACGAGAC CTATGTGACG
TCGGAAATCC CTCAAGAGTT TGGTCTAAAA CAAACCTTTT TAGGTTAA
 
Protein sequence
MKKPLIVQKF GGTSVGSIER MQTVAEHIIK AKNDGNQVVV VVSAMAGETN RLVGLAQQVD 
SVPNARELDV LLSAGEQVSM ALVAMTLHKM GYAARSLTGA QANIVTDNQH NDATIKHIDT
RTITELLEQD FIVIVAGFQG INENGDITTL GRGGSDTSAV ALAGALNADE CQIFTDVDGI
YTCDPRIVPS ARKLDVIDFP SMEEMARKGA KVLHLPCVQY AWKHAVPLRV LSTFEVNQGS
LIKGSAATHA VCGIALQRDM ALIRVESESF PSIIKQCQML GIEVCTTIEE PTNSAFVIKR
DAYAKLQLVG ADKIRGSEPV SLITKVGIQA GALVAHARQT LAQHGIDVRY VSASEQSSML
MLDPANVDRA ANILHETYVT SEIPQEFGLK QTFLG