Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0074 |
Symbol | |
ID | 5136530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 70096 |
End bp | 71283 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531534 |
Product | aspartate kinase |
Protein accession | YP_001216047 |
Protein GI | 147674175 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000101932 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAAGC CCCTTATCGT GCAAAAGTTC GGCGGAACTT CGGTGGGTTC AATAGAAAGA ATGCAAACCG TAGCCGAACA CATCATTAAG GCGAAGAATG ATGGCAATCA AGTTGTCGTA GTGGTCTCTG CCATGGCAGG GGAAACCAAT CGACTGGTGG GTTTAGCTCA ACAAGTAGAT AGCGTACCAA ACGCTAGAGA ACTTGATGTT TTGCTCTCTG CTGGTGAGCA GGTGTCAATG GCCTTAGTGG CAATGACACT GCACAAAATG GGCTATGCCG CCCGCTCACT AACCGGAGCT CAAGCGAATA TTGTGACGGA CAATCAACAC AATGACGCGA CGATTAAACA TATTGATACT CGAACGATTA CCGAGTTGCT AGAACAAGAT TTTATTGTGA TAGTCGCGGG TTTTCAGGGC ATTAATGAAA ATGGGGATAT CACTACGTTA GGCCGTGGTG GCTCAGACAC CAGTGCTGTG GCATTGGCTG GGGCACTGAA TGCCGACGAA TGCCAAATAT TCACTGATGT CGATGGGATA TACACTTGTG ATCCACGCAT TGTACCAAGT GCTCGTAAGC TGGATGTGAT TGATTTTCCT TCCATGGAAG AGATGGCGCG CAAAGGTGCA AAAGTGTTGC ACCTACCGTG CGTGCAGTAT GCTTGGAAGC ATGCAGTGCC ACTCAGAGTG CTCTCTACCT TTGAAGTGAA CCAAGGCAGT TTAATTAAAG GCAGTGCCGC AACTCACGCA GTATGTGGTA TTGCTCTTCA GCGCGATATG GCGCTGATAA GAGTGGAGAG TGAATCTTTC CCAAGCATCA TCAAGCAGTG CCAAATGCTC GGCATTGAAG TCTGCACAAC CATTGAAGAG CCTACCAATA GTGCATTTGT GATTAAACGC GATGCTTATG CCAAGCTACA ATTAGTCGGC GCAGATAAAA TTCGTGGTTC AGAGCCCGTG AGCCTCATCA CCAAGGTCGG TATACAAGCC GGGGCATTAG TTGCCCATGC ACGTCAGACC TTAGCGCAAC ATGGCATCGA TGTGCGTTAT GTCTCGGCCT CGGAACAATC ATCTATGCTA ATGTTAGACC CTGCAAATGT GGATCGTGCG GCAAATATTT TGCACGAGAC CTATGTGACG TCGGAAATCC CTCAAGAGTT TGGTCTAAAA CAAACCTTTT TAGGTTAA
|
Protein sequence | MKKPLIVQKF GGTSVGSIER MQTVAEHIIK AKNDGNQVVV VVSAMAGETN RLVGLAQQVD SVPNARELDV LLSAGEQVSM ALVAMTLHKM GYAARSLTGA QANIVTDNQH NDATIKHIDT RTITELLEQD FIVIVAGFQG INENGDITTL GRGGSDTSAV ALAGALNADE CQIFTDVDGI YTCDPRIVPS ARKLDVIDFP SMEEMARKGA KVLHLPCVQY AWKHAVPLRV LSTFEVNQGS LIKGSAATHA VCGIALQRDM ALIRVESESF PSIIKQCQML GIEVCTTIEE PTNSAFVIKR DAYAKLQLVG ADKIRGSEPV SLITKVGIQA GALVAHARQT LAQHGIDVRY VSASEQSSML MLDPANVDRA ANILHETYVT SEIPQEFGLK QTFLG
|
| |