| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1052 |
|---|
| Symbol | |
|---|
| ID | 5134278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 1026443 |
|---|
| End bp | 1026895 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640531374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001215888 |
|---|
| Protein GI | 147671458 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCTT TGAGAAAACA CATTGAAGAG TGTGTAGGTG ATCAAATCGC TCAAAGGCTT
GAGGCTGAAA TGACGGATAT CTCGTTGAAG TTATTACCCA AACACATGGG CAATGGCTTC
AACTTAATGC AGCAAAAATA CAGAGCAGAG TTTTATTTCG ACAGATTCCC GTTCAAGAAA
TACGACCCTG CGGTGCTATT TGCCAATGTT GGCGCATGGA TTCTTGACCA TGATCTTGAC
CGAGCGGAAA GCAATGGGCT GCGTGACCCA GATATTGATG TAGTTCTTGA AGATGAAAAC
AGTGCTGAAG TGCTAGTCAT CATTGAATTT GAAGAAGATA TCAAAATCAT CGAATGCGAA
AACGGTGGCA TCAAATGGCG TGGGAAAAAA TGGAAAATCG CTGAATACGA AATTTGGGTA
GCTGAAAACC TGATCGATGT GGTGAACAGA TGA
|
|---|
| Protein sequence | MRALRKHIEE CVGDQIAQRL EAEMTDISLK LLPKHMGNGF NLMQQKYRAE FYFDRFPFKK
YDPAVLFANV GAWILDHDLD RAESNGLRDP DIDVVLEDEN SAEVLVIIEF EEDIKIIECE
NGGIKWRGKK WKIAEYEIWV AENLIDVVNR
|
|---|
| |