| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1011 |
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| Symbol | |
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| ID | 5134092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 989474 |
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| End bp | 990730 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531333 |
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| Product | thermolabile hemolysin |
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| Protein accession | YP_001215847 |
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| Protein GI | 147671733 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GACTCTCTAT TCTAATCGCT GGCTTAGCTA GCTTATCGGT TAATGCCGCC
ACTGAACCAT GGGCTTCCCC TGAGGCAGAA GTGCTTAGCC GCGCGCAAAT TCAACAAGTA
CAAGGTAAAC AAACCTATAC CTATGTGCGT TGTTGGTATC GTCCTGCAGC CACTCATGAT
GACCCCTACA CCACTTGGGA GTGGGCAAAG AATGCGGATG GTAGCTATTA CACTATTCAG
GGTTATTGGT GGTCGAGTAT TCGACAAAAA AACATGTTTT ACACGACAGT TCAGCCAGAA
ACCCTGTTAG AACGCTGTGA AGAGACGCTT GGTGTCAACC ACGATTTTGC CGATATTACC
TATTTCGCGG CCGATCATCG CTTTTCATAC AACCACACTA TTTGGAGCAA TGATCCGGAG
GTTCAGTCCA ACCGCATCAG CAAAGTGATC GCGTTTGGCG ATAGCCTTTC CGATACGGGC
AACATTTTCA ATGCCTCACA GTGGCGCTTC CCCAACCCTG ACTCATGGTT CCTAGGCCAT
TTCTCGAATG GATTCGTCTG GACTGAATAC CTAGCACAAG GTTTGAATGT ACCTCTGTAT
AACTGGGCGG TCGGTGGCGC GGCAGGGCGT AACCAGTATG TGGCATTAAC GGGCGTTTAT
GAGCAGGTCA GCTCTTATCT GTCTTATATG CGACTGGCTA AAAACTATCA GCCAGAAAAC
AGCTTGTTTA CCTTGGAATT TGGTCTGAAC GACTTTATGA ACTACAACCG TTCCTTGGCC
GATGTGAAAG CCGATTATAG TTCCGCGCTG ATCCGTCTTA TTGATGCGGG AGCAAAAAAT
CTTGTCCTGA TGACCTTGCC GGACGCAACG CGCGCGCCAC AGTTTCAATA TGCCACGCAA
GAGCAAATTG ATACTGTACG CAGCAAAATC ATCGGCATGA ATGCCTTTAT CCGTGAGCAA
GCACGTTACT ACCAAATGCA AGGTATTCGC ATCGTACTGT TTGATGCTTA TACCCTGTTT
GACAGTATCA CTACTCAGCC AGAGCAACAT GGATTTGCCA ACGCGAACTC CCCTTGCTTA
GATATTCGAC GCAACTCTGC CGCCGATTAC CTATTGTCAC ATTCACTCTC TGCGGAGTGC
GCCAAGCAAG GCTCAGATCG CTTTGTGTTT TGGGAAGTGA CTCATCCCAC CACCGCGATT
CATCACTATC TTGCAGAGCA GATTTTGGCC ACCGAAATGG CACAATTTCC GCTTTAA
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| Protein sequence | MKKRLSILIA GLASLSVNAA TEPWASPEAE VLSRAQIQQV QGKQTYTYVR CWYRPAATHD
DPYTTWEWAK NADGSYYTIQ GYWWSSIRQK NMFYTTVQPE TLLERCEETL GVNHDFADIT
YFAADHRFSY NHTIWSNDPE VQSNRISKVI AFGDSLSDTG NIFNASQWRF PNPDSWFLGH
FSNGFVWTEY LAQGLNVPLY NWAVGGAAGR NQYVALTGVY EQVSSYLSYM RLAKNYQPEN
SLFTLEFGLN DFMNYNRSLA DVKADYSSAL IRLIDAGAKN LVLMTLPDAT RAPQFQYATQ
EQIDTVRSKI IGMNAFIREQ ARYYQMQGIR IVLFDAYTLF DSITTQPEQH GFANANSPCL
DIRRNSAADY LLSHSLSAEC AKQGSDRFVF WEVTHPTTAI HHYLAEQILA TEMAQFPL
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