| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0988 |
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| Symbol | |
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| ID | 5134769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 963582 |
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| End bp | 964466 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531310 |
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| Product | putative L-xylulose 5-phosphate 3-epimerase |
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| Protein accession | YP_001215824 |
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| Protein GI | 147671411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3623] Putative L-xylulose-5-phosphate 3-epimerase |
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| TIGRFAM ID | [TIGR00542] hexulose-6-phosphate isomerase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0393582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC ATTTACTGCG CCACCGCGTT GGCTTGTATG AAAAAGCGCT GCCCAATCAC
TTAAGTTGGG AGGAAAAACT GGCCTGCACC AAAGAGCTCG GCTTCGATTT TCTGGAGATC
TCGGTGGATG AAAGTGACGA GCGCCGCAGC CGCCTCGATT GGGATGATGC CACCATTTAT
TCATTGCACC GCCTTTGTGA GGAGTATGGC GTGCCGCTGC AATCGATGTG CCTTAGCGCT
CATCGCAAGT TTCCGTTTGG CTCGGCCGAT CCCGCGCTGC GCGATGAGGC GCTGAAAATT
ATGCAAAAGG CGATAACCCT CGCCTACAAA CTGGGTATTC GCACCATCCA ATTGGCGGGG
TATGACGTCT ATTACGAGCC CGCCAACTCA GCCACTCATC AGCGTTTTAT TGAGGGTATG
CAACACGCCG CCCGTTTAGC TGAGCGCGCT GGCGTGATGT TAGCCGTTGA GATCATGGAT
ACCCCTTATC TCAATGCGCT GAGTAAATTT GAAGTGCTGA ATCGGCAGAT CCAATCGCCC
TTTTTTACGG CGTATCCAGA CGTTGGCAAC ATCTCAGGCT GGAATTATGA CTTGCTGACC
GAACTCTCGT TAAGCAAGCC CCACATCACT CAGATCCACC TCAAGGACAC TTACAAGGTG
AGCGAACAGT ACGCCGGACA GTTTCGTGAT TTAGTGATTG GCGAAGGCGA CGTCGACTTT
GATGAACTGT TCTGCCGCTT AAAAGCGCTG GATTGCGTGG TGCCGTTAGT GATTGAAATG
TGGGCGCACG ATGAACAGTG GCAACAGCAT ATTCACACCG CGCAGCGTCG ATTAAACCAA
GCTTGTGATC GCGCCGAACT CCCTCGCTTG TTCCCTCATC TTTAA
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| Protein sequence | MYQHLLRHRV GLYEKALPNH LSWEEKLACT KELGFDFLEI SVDESDERRS RLDWDDATIY
SLHRLCEEYG VPLQSMCLSA HRKFPFGSAD PALRDEALKI MQKAITLAYK LGIRTIQLAG
YDVYYEPANS ATHQRFIEGM QHAARLAERA GVMLAVEIMD TPYLNALSKF EVLNRQIQSP
FFTAYPDVGN ISGWNYDLLT ELSLSKPHIT QIHLKDTYKV SEQYAGQFRD LVIGEGDVDF
DELFCRLKAL DCVVPLVIEM WAHDEQWQQH IHTAQRRLNQ ACDRAELPRL FPHL
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