Gene VC0395_0973 details

Gene Information

• Locus tag: VC0395_0973
• ID: 5134057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 949119
• End bp: 949769
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640531295
• Product: transcriptional regulator
• Protein accession: YP_001215809
• Protein GI: 147671829
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 62
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGTA TTTTGCTGAT TGAAGATGAC ACCTTACTCG GCCAAGGTCT GCGCGATTAT 
CTGCATGACC ATGGTTATGC ATGCGAGTGG GTAACGCAGA GCCAACAGGT CGAAAAGCAC 
TGGTTCAGTA CCGATCTGGT GATTTTGGAT CGGCAATTGC ACGATGGTGA CAGCCTGAAA 
CATCTGCCGC ACTGGTTGAT GCTTAAAGCC CTGCCAGTGA TCGTACTGAC CGCCAAAATT 
GAAGTGGAGC AACGGATTGA AGGGCTCAAA GCGGGGGCGA AAGATTATGT GCTCAAGCCC 
TTTTCCCACC AAGAGTTGCT GGCACGCATC GAAGCGCAAC TGCGCCCGCT CGGCAGTAGC 
GTACTCAGCT ACGCGGATAT TGTGGTCGAT GTGGCTAATC GATCTGTGCT GCATAACCAA 
ACGCCGGTTG AGCTCAAACC GAAAGAGTTT CAACTGCTGC TGATGCTATT GCAAAATCCG 
GGGCGCGTTT ATCACCGTGA TGAGCTGCTC AATCTTATTT GGGGTTATCA ATATTTCCCG 
ACCACACGCA CCGTGGATAA CCACATTTTG CATTTGCGGC AAAAACTGCC ACAACTGGAT 
ATCGAGACCC TGCGCGGCGT CGGTTATCGC CTCAAAGGAG CCTCCGTATG A 

 

Protein sequence

MKRILLIEDD TLLGQGLRDY LHDHGYACEW VTQSQQVEKH WFSTDLVILD RQLHDGDSLK 
HLPHWLMLKA LPVIVLTAKI EVEQRIEGLK AGAKDYVLKP FSHQELLARI EAQLRPLGSS 
VLSYADIVVD VANRSVLHNQ TPVELKPKEF QLLLMLLQNP GRVYHRDELL NLIWGYQYFP 
TTRTVDNHIL HLRQKLPQLD IETLRGVGYR LKGASV