| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0966 |
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| Symbol | |
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| ID | 5134435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 943992 |
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| End bp | 945170 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640531288 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001215802 |
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| Protein GI | 147671506 |
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| COG category | [H] Coenzyme transport and metabolism
[K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAA TTTCAGAATT AGCGGTTAAG GCGGGGCTCT CTCGAACCAC ACTGCTTTAC
TACGAGAAGT TAGGGTTGAT TCGGGGACAA CGTCTTGATA ATGGCTATCG CTATTACAAC
GAGAGTGATC TGCAGCAACT GTTTCTTATC CAACAGCTTC AGAGTGCGGG GCTCTCATTA
AAAGAGTGTG AAGAGTGCTT ACAGGCGAAA CTAGACCGAA CCCTATTGGA AAGACGTTTA
AGCCAACTCG ATGATGAAAT TGAGAAAAAG GTTCGTGCTC GAGAATTGCT TTTAGCCTTG
CTCGGCGAAC GTCCACAAAG AGAGTTACAC CACTCTCTCA GTAAACATGC GCCAAACGCT
TACTTAAGTT GGCTAAACAC GCAAGGTTAC AGTGAAAAAG AGGCGCTCCG ATTAAAATGG
TTATCGAAAG ATATGAATGA ACACGACATC TATATGCAAG ATTTCATGAC GGTTTTTGCC
TCTTTGCAAC ACTGGGGCCC CGGTAGTGAG CAAGATAGCT TAAAAGCCAT TTCCTTGATG
TCGATGCAAA ACATGCAGCA CATCCTCGAC ATCGGCTGCG AAACGGGCCT TTCGACACTC
CTGCTGGCTG AAAACAGTTC GGCGCACATT ACTGCCGTCG ATAATGAACC CATCGCGATT
GAGCAACTTG AGAAGCAACG CCAGCACTCA CCATGGAAAG AGCAGATATC CCCGGTATTG
GGTTCCATGA CAGCGCTCCC CTTTGCAGCG AAAAGCTTTG ATGCAATCTG GGCAGAAGGC
TGTGTCTACA TCATGGGTAT GGAGAACGCA CTCAAGCAGT GGAAACCTTT TTTAGCCGAT
AACGCTATCT TGATGGTCAG TGATTTGGTC TGGCTCACTG AGAATCCAAA ACCGGAAGCT
CAAGAATTTT GGCAATCCGA ATACCCAGAT ATCCAATCGA TACCTTCTCG AATCAAGCTT
TTCAAAAAAC TGGGGTATGA GGTGATGGAG CATTTCTCAT TAGGCATCGA TGCATGGCAA
AACTACTGGT TACCGCTGCA AAACCGCGTC CAAGAGTTAA AACTTCGGCT GACAAACTCC
CAAGCCTTGT CTGACATAGA AAAGGAGATT GCTATCTATG AACGAAGTGC TGCCAAAGAT
TTTACTTATC AGTACTTTGT TTTGAAACTT AATCACTAG
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| Protein sequence | MYLISELAVK AGLSRTTLLY YEKLGLIRGQ RLDNGYRYYN ESDLQQLFLI QQLQSAGLSL
KECEECLQAK LDRTLLERRL SQLDDEIEKK VRARELLLAL LGERPQRELH HSLSKHAPNA
YLSWLNTQGY SEKEALRLKW LSKDMNEHDI YMQDFMTVFA SLQHWGPGSE QDSLKAISLM
SMQNMQHILD IGCETGLSTL LLAENSSAHI TAVDNEPIAI EQLEKQRQHS PWKEQISPVL
GSMTALPFAA KSFDAIWAEG CVYIMGMENA LKQWKPFLAD NAILMVSDLV WLTENPKPEA
QEFWQSEYPD IQSIPSRIKL FKKLGYEVME HFSLGIDAWQ NYWLPLQNRV QELKLRLTNS
QALSDIEKEI AIYERSAAKD FTYQYFVLKL NH
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