Gene VC0395_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0950 
Symbol 
ID5134426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp927480 
End bp928103 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content49% 
IMG OID640531272 
Producttranscriptional regulator 
Protein accessionYP_001215786 
Protein GI147672473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG ACATTTATGA TGAGTACCCA TCCATCACTT TGGCTCGCGA ATCGGGCGAG 
CAAGGTATCG AGCCACTCAA GCTGGGTCAG CGGATCAAAG ATATTCGCAC GCGATTAGGC 
ATCACGCTTG AAGAGGCGAG CCAGCGTACT GGTCTCGCTC GCTCTACACT GAGCAAAATT 
GAAAACGAAC AGATTTCGCC AACCTTTCAG GCTATGCAAA AATTGGCGCA TGGTTTGCAG 
ATTGAAATGC CGCAACTCTT TGAGCCACCG AAGAAAATTG TAGCGACAGG GCGGCGTGAT 
ATTACCCGTA AAGAAGCAGG AAAACCGCAC CCAACCCAAA CCTATGAACA TGAATTGCTC 
GCGACTCAAC TTTCTAACAA AAAGATGATG CCGTTCAAAA GCCGCGTGCG TGCCAGAGCC 
TTTGAAGAGT ACAGCGATTG GGTGCGTCAC GATGGTGAAG AGTTTCTGCT GATCCTTGAA 
GGTGAAGTGA TGTTCTACAG CGAATTTTAT GAGCCGGTAC ATCTGGTGGA AGGGGACAGT 
GTGTATTACG ACGCCAACAT GGGACACATG CTGGTTTCAG TGAGTGAAGA GGATGCGCTG 
ATCCTTTGGG TCACCGCAAG ATAG
 
Protein sequence
MSEDIYDEYP SITLARESGE QGIEPLKLGQ RIKDIRTRLG ITLEEASQRT GLARSTLSKI 
ENEQISPTFQ AMQKLAHGLQ IEMPQLFEPP KKIVATGRRD ITRKEAGKPH PTQTYEHELL 
ATQLSNKKMM PFKSRVRARA FEEYSDWVRH DGEEFLLILE GEVMFYSEFY EPVHLVEGDS 
VYYDANMGHM LVSVSEEDAL ILWVTAR