| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0727 |
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| Symbol | |
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| ID | 5134235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 789331 |
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| End bp | 790980 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531049 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215563 |
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| Protein GI | 147672037 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3044] Predicted ATPase of the ABC class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.942995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGAC TAATTGCAAC ACTCAAGAAA CTCGAAAAGC AGAACTATCG TGCTTATCAG
CAGATCAAAG GTCAGTACGA CTTTGGCGAC TTTACTCTGT TCATCGATCA CATTCAGTCT
GATCCATACG CTTCAGCCTC TCGCCTGCGT GCTACGCGCG CTTGGTCGTT GACGGGTTTA
GATTGGCTGA AAGAGAAATC CCCTGCTTAT CAAATGGCTG CGCGTGATTT TATCGCTCGT
GCTTTTGCAG AGTTCGCCAA ACAAGACAAC AGCTTATCGA TCGCGATTAG CGGTCAAACG
GTTCTCGATA GTACCTCTGT TCTGTTTAAC GAACACGGCA TCGAACTGCG TTTTCGCATG
AGTATGCCAG CGGAAGGACG CGATATTCTG GCGAAAAAAG CGCTGAATAT CTTAACCTTT
CACCTGCCGA AATACATTCG CCGTGCCACG CTTGAACGCG AGTTAGATAA AGCCGCGCTA
CTGCATCATT GTGAAATCGT AGAAGATCAG GAAGCGATGC GCGCTCAACT GGACGATCTC
GGTCTTGTCG CTTTCATCGC TAACGGCAGT GTATTGCCAC GATTAGCCGG TAACTGCGAT
CTGCCAATGA AAGAGGCTGT TCCTTTCATC GCCCCAAAAT CTCTCGAAGT CACCCTCTCA
ACGCCTAACC AAGGTGAACT GGTGGGTATG GGTATTCCAC AAGGGATTAC CTTGATCGTG
GGCGGTGGGT TCCATGGTAA ATCAACCTTG CTGACCGCGC TTGAGCGTTC GGTCTACAAC
CATATTCCGG GTGATGGTCG TGAGCGCATG GTCACTGATG TTAAAGCGAT GAAGATCCGC
GCGGAAGAAG GCCGTTGTGT ACACAATCTC AATCTATCGA ACTACATCAA TCATTTACCT
ATGGGTAAAG ACACGACCGA TTTCAGCACG CAAGATGCTT CTGGCTCTAC CTCGCAGTCG
GCTTGGTTAC AAGAGTCGAT TGAAGCGGGT GTCACAACTC TGCTGATTGA TGAAGACACT
TCTGCTACCA ACTTTATGAT CCGTGATGAG CGCATGCAGG CACTGGTCAG CAAAGGTGAA
GAGCCGATCA CACCGTTGGT GGATCGTATC GGTCAGTTAC GTGATGATCT CGGCATCTCG
ACACTGGTGG TGATGGGGGG CTCTGGTGAC TATCTGGATG TAGCCGATAC CGTCATTCAG
ATGCACGACT ACCAACCCGT CGACGTAACA GAAAAAGCGC GTGAAGTGAT TGCCCAGCAC
CCAACGCTGC GTCGTAATGA GTGTGAAACC CCACTCGCGA CCTTTACACC ACGAGCTCTC
AACTGTGCCA CTTTGCAAAA ACTGCTGCTG GATGGCAAAT TCCGTGTGTC GGCTAAAGGC
TTGGATGCTC TGCGTTTTGG TAAAGAGTTC ACGGACATTT CCGCACTGGA GCAGTTGCAA
AGTTCAAGTG AAGTGAATGC CATTGGTTGG CTGTGGTTCC AACTGGCACA ACTGCCAGGT
TGGACAGACA ACCCAGCCAA AGCCATGACT AAAATGCTTG AAGGTGACTG GTATCAAGCC
ATGCCAAACC ACGGTGATTT AGCTAAGCCG CGAATTTTAG ATGCAATGGC AGCCCTAAAC
CGGATGCGAA AAGCACAATT TAAAGCCTAA
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| Protein sequence | MDRLIATLKK LEKQNYRAYQ QIKGQYDFGD FTLFIDHIQS DPYASASRLR ATRAWSLTGL
DWLKEKSPAY QMAARDFIAR AFAEFAKQDN SLSIAISGQT VLDSTSVLFN EHGIELRFRM
SMPAEGRDIL AKKALNILTF HLPKYIRRAT LERELDKAAL LHHCEIVEDQ EAMRAQLDDL
GLVAFIANGS VLPRLAGNCD LPMKEAVPFI APKSLEVTLS TPNQGELVGM GIPQGITLIV
GGGFHGKSTL LTALERSVYN HIPGDGRERM VTDVKAMKIR AEEGRCVHNL NLSNYINHLP
MGKDTTDFST QDASGSTSQS AWLQESIEAG VTTLLIDEDT SATNFMIRDE RMQALVSKGE
EPITPLVDRI GQLRDDLGIS TLVVMGGSGD YLDVADTVIQ MHDYQPVDVT EKAREVIAQH
PTLRRNECET PLATFTPRAL NCATLQKLLL DGKFRVSAKG LDALRFGKEF TDISALEQLQ
SSSEVNAIGW LWFQLAQLPG WTDNPAKAMT KMLEGDWYQA MPNHGDLAKP RILDAMAALN
RMRKAQFKA
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