| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0717 |
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| Symbol | |
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| ID | 5134778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 777244 |
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| End bp | 777954 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531039 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215553 |
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| Protein GI | 147672052 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
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| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.0448352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCC CATTTGAAAT TGAGCCGATT GCGGAAGGCA GCATACTGGT GCGCTTTCAG
CATCCGGCTG ATGCAACCTT AGCGATGCAT ATTGGCCAAT GTGCGCATGA CATCATGCAG
AGTTTGGCCT ATGGACTGAT GAACGTCACT CCCTCTTATA CCACCTTGCT GATTGATTAT
TTACCCTACC GTTTAACACA AAAGGAGCTG GTGGCGCAGT TGACTTTACT GCTTAATCAA
CCGCGACAGG CTAACCACGC GAACGCCAAT CTCATTGAGC TCCCCGTGTA CTACCATCCT
GATGTAGGAC TTGACCTCAT TCGCTATCAG GAACAAGGGC TTGCATTAGC AGAAGTGATT
CAGTTGCATA CCTCTGTGAC TTACACGGTG GCGGCGATTG GCTTTGCTCC CGGGTTTGCC
TTTATGACTC AAGTCGCCGA GCCGCTGCGC CGCCCCAGAC GCACTACCCC GCGCCTAATG
CTCCCCAAAG GCAGCGTAGG GATTGCCGAG CAACAAACGG CCATTTATCC CAACGCCTCT
CCGGGCGGCT GGAACATTAT CGGTAACTGT CCGCAAACCT TGTTTGACCC GAGACAAGAG
CCGATGTCAC CTTGGCAGAT TGGCACTCAA GTGCGATTTC GCTCGATTGA ACGTGATGAG
TTTATTCAGT TGGGCGGTGT GATTGAGCCG TACTCAATCC ACAGAGCTTA A
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| Protein sequence | MSIPFEIEPI AEGSILVRFQ HPADATLAMH IGQCAHDIMQ SLAYGLMNVT PSYTTLLIDY
LPYRLTQKEL VAQLTLLLNQ PRQANHANAN LIELPVYYHP DVGLDLIRYQ EQGLALAEVI
QLHTSVTYTV AAIGFAPGFA FMTQVAEPLR RPRRTTPRLM LPKGSVGIAE QQTAIYPNAS
PGGWNIIGNC PQTLFDPRQE PMSPWQIGTQ VRFRSIERDE FIQLGGVIEP YSIHRA
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